estExt_Genewise1.C_2180024 (Physcomitrella patens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_Genewise1.C_2180024 T138845_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_2180024 C2H2 ZF 144 165
estExt_Genewise1.C_2180024 C2H2 ZF 171 191

Links

Other C2H2 ZF family TFs
Other Physcomitrella patens TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm005926 Prunus mume Pm005926 I 0.774
AMTR_s00024p00098860 Amborella trichopoda AMTR_s00024p00098860 I 0.774
gene00618-v1.0-hybrid Fragaria vesca gene00618-v1.0-hybrid I 0.774
chr4.CM0387.280.nc Lotus japonicus chr4.CM0387.280.nc I 0.774
PRUPE_ppa005331mg Prunus persica PRUPE_ppa005331mg I 0.774
SapurV1A.0074s0350 Salix purpurea SapurV1A.0074s0350 I 0.769
GSMUA_Achr5G23130_001 Musa acuminata GSMUA_Achr5G23130_001 I 0.769
cassava1947.valid.m1 Manihot esculenta cassava1947.valid.m1 I 0.769
GSMUA_Achr7G18610_001 Musa acuminata GSMUA_Achr7G18610_001 I 0.769
Bo5g043540 Brassica oleracea Bo5g043540 I 0.768
Bra024771 Brassica rapa Bra024771 I 0.768
Lus10031314.g Linum usitatissimum Lus10031314.g I 0.765
Lus10031882.g Linum usitatissimum Lus10031882.g I 0.765
Solyc01g005060.2 Solanum lycopersicum Solyc01g005060.2 I 0.765
Lus10026369.g Linum usitatissimum Lus10026369.g I 0.765
Pm025274 Prunus mume Pm025274 I 0.765
Ciclev10015315m.g Citrus clementina Ciclev10015315m.g I 0.765
Gorai.005G134600 Gossypium raimondii Gorai.005G134600 I 0.765
PRUPE_ppa004447mg Prunus persica PRUPE_ppa004447mg I 0.765
Gorai.009G329200 Gossypium raimondii Gorai.009G329200 I 0.765
Ca_05083 Cicer arietinum Ca_05083 I 0.765
orange1.1g014184m.g Citrus sinensis orange1.1g014184m.g I 0.765
GLYMA08G09760 Glycine max GLYMA08G09760 I 0.765
PK25720.1 Cannabis sativa PK25720.1 I 0.765
GLYMA05G26780 Glycine max GLYMA05G26780 I 0.765
GSMUA_Achr10G29940_001 Musa acuminata GSMUA_Achr10G29940_001 I 0.764
Bostr.15697s0010 Boechera stricta Bostr.15697s0010 I 0.763
Cagra.2231s0014 Capsella grandiflora Cagra.2231s0014 I 0.763
AtIDD16 Arabidopsis thaliana AT1G25250 I 0.763
Carubv10009424m.g Capsella rubella Carubv10009424m.g I 0.763
GSMUA_Achr6G02490_001 Musa acuminata GSMUA_Achr6G02490_001 I 0.763
IDD14 Arabidopsis thaliana AT1G68130 I 0.763
Bo3g139880 Brassica oleracea Bo3g139880 I 0.763
Bra010981 Brassica rapa Bra010981 I 0.763
OB09G18760 Oryza brachyantha OB09G18760 I 0.763
Thhalv10009376m.g Eutrema salsugineum Thhalv10009376m.g I 0.763
evm.TU.supercontig_7.131 Carica papaya evm.TU.supercontig_7.131 I 0.759
orange1.1g037502m.g Citrus sinensis orange1.1g037502m.g I 0.759
gene09325-v1.0-hybrid Fragaria vesca gene09325-v1.0-hybrid I 0.759
SapurV1A.0015s0850 Salix purpurea SapurV1A.0015s0850 I 0.759
SapurV1A.0055s0020 Salix purpurea SapurV1A.0055s0020 I 0.759
SapurV1A.1169s0070 Salix purpurea SapurV1A.1169s0070 I 0.759
Gorai.006G190500 Gossypium raimondii Gorai.006G190500 I 0.759
Gorai.008G293000 Gossypium raimondii Gorai.008G293000 I 0.759
Gorai.002G171100 Gossypium raimondii Gorai.002G171100 I 0.759
Gorai.007G002600 Gossypium raimondii Gorai.007G002600 I 0.759
28952.m000016 Ricinus communis 28952.m000016 I 0.759
POPTR_0012s03730 Populus trichocarpa POPTR_0012s03730 I 0.759
POPTR_0015s05180 Populus trichocarpa POPTR_0015s05180 I 0.759
Solyc06g072360.2 Solanum lycopersicum Solyc06g072360.2 I 0.759
TCM_011210 Theobroma cacao TCM_011210 I 0.759
POPTR_0010s11160 Populus trichocarpa POPTR_0010s11160 I 0.759
POPTR_0008s13980 Populus trichocarpa POPTR_0008s13980 I 0.759
Bra024841 Brassica rapa Bra024841 I 0.759
PGSC0003DMG400026959 Solanum tuberosum PGSC0003DMG400026959 I 0.759
PGSC0003DMG400031049 Solanum tuberosum PGSC0003DMG400031049 I 0.759
TCM_039880 Theobroma cacao TCM_039880 I 0.759
VIT_01s0011g06400 Vitis vinifera VIT_01s0011g06400 I 0.759
Cucsa.122150 Cucumis sativus Cucsa.122150 I 0.759
Aquca_002_01252 Aquilegia coerulea Aquca_002_01252 I 0.759
Ciclev10020125m.g Citrus clementina Ciclev10020125m.g I 0.759
Cucsa.112090 Cucumis sativus Cucsa.112090 I 0.759
cassava36596.valid.m1 Manihot esculenta cassava36596.valid.m1 I 0.759
VIT_17s0000g01870 Vitis vinifera VIT_17s0000g01870 I 0.759
Cla018945 Citrullus lanatus Cla018945 I 0.759
cassava18079.valid.m1 Manihot esculenta cassava18079.valid.m1 I 0.759
evm.TU.supercontig_2.118 Carica papaya evm.TU.supercontig_2.118 I 0.759