CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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estExt_GenewiseH_1.C_30347
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_GenewiseH_1.C_30347
T138896_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_GenewiseH_1.C_30347
C2H2 ZF
10
32
YRCEECSKQFSQLDNLKRHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
38
60
YTCEECSKQFSEQSSLKKHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
66
88
YRCEECGRQFSESGSLKRHIMTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
94
116
YKCDQCSKQFSQLGALRTHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
122
144
YACGTCSKQFSQLDNLNRHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
150
172
YKCDTCSKHFSDPSTLRKHIRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
178
200
YHCEECGRQFSEHGSLKMHMKTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
206
228
YTCEKCNKHFSQPSNLKTHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
234
256
YRCEECSKQFRTPGHLKSHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
262
284
YRCEECGRQFSELHSLKNHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
290
312
YRCEECSKQFSELGSLKSHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
318
340
YKCEECSKRFCQLNYLKRHMRYH
estExt_GenewiseH_1.C_30347
C2H2 ZF
346
368
YECEHCSKQFVELGALTSHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
374
396
YKCEECSKEFSELCSLKKHTRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
402
424
YKCEHCSKQFSTLGSMKIHIRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
430
452
YSCGECSKQFGDPSTLKKHLRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
458
480
YKCEECSRQFSDLSSLRKHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
486
508
YKCEQCSKQFSQASALKVHMRTH
estExt_GenewiseH_1.C_30347
C2H2 ZF
514
538
YTCDHDGCNKKFSALGNLKVHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found