CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_2570145
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_2570145
T138914_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_2570145
C2H2 ZF
1
22
MCGECGYKTAWRSNLSQHRRTH
estExt_gwp.C_2570145
C2H2 ZF
28
50
YKCDQCNYSAAQKSSLAIHLAKH
estExt_gwp.C_2570145
C2H2 ZF
56
78
YMCGECGYRTAQKFILSRHMKTH
estExt_gwp.C_2570145
C2H2 ZF
84
106
YKCNQCDYSATCKSNLDRHLAKH
estExt_gwp.C_2570145
C2H2 ZF
112
134
YMCEECGFRAAQKSDLSTHVRTH
estExt_gwp.C_2570145
C2H2 ZF
140
162
YKCDQCDYSAAVKSTLDRHQAKH
estExt_gwp.C_2570145
C2H2 ZF
168
190
YMCGECGYKSARKFDLSLHMRTH
estExt_gwp.C_2570145
C2H2 ZF
196
218
YKCDKCDYSAARKCHLDQHLAKH
estExt_gwp.C_2570145
C2H2 ZF
224
246
YMCGECGYRTAQRYRLSRHMRTH
estExt_gwp.C_2570145
C2H2 ZF
252
274
YKCDQCDYSAAEKANFDRHLANH
estExt_gwp.C_2570145
C2H2 ZF
280
302
YMCGDCGYRTTRKPDLAKHMRTH
estExt_gwp.C_2570145
C2H2 ZF
308
330
YKCDQCDYSALQKSDLYKHLVKH
estExt_gwp.C_2570145
C2H2 ZF
336
358
YMCGECGYRSALKSTLSKHMRTH
estExt_gwp.C_2570145
C2H2 ZF
364
386
YKCDQCDYSAAQTSALNQHLAIH
estExt_gwp.C_2570145
C2H2 ZF
392
414
YMCGECGYRTVKKCHLSEHMRTH
estExt_gwp.C_2570145
C2H2 ZF
420
442
YKCDHCDYSAAVKSSLDRHLAQH
estExt_gwp.C_2570145
C2H2 ZF
448
465
YMCWECGYRTAHQSNLCL
estExt_gwp.C_2570145
C2H2 ZF
492
514
YKCDQCDFSAAHKISLEQHLAKH
estExt_gwp.C_2570145
C2H2 ZF
520
542
YMCGECGYRTTRKSDLCKYMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found