CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_2000352
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.C_scaffold_2000352
T138993_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
59
79
YCNLCKRVFKDRNGLKNHVDN
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
85
105
TYCNLCLSAFKDQWGLKNHFE
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
114
139
FVCLTCLTGFNTSAELDRHLQTAETH
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
142
161
CQTCQRRFRNQDERDEHWVK
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
167
191
HCLQPGCAFDGPDQASLTEHLRRDH
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
192
213
FQCQGCKHILPSLTKLNQHYET
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
218
239
LPCPQCGEKCAGKAQLELHMTH
fgenesh1_pg.C_scaffold_2000352
C2H2 ZF
241
263
FRCEECNFYTSHKGNFDIHMTKH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
0 Related TFs
">No related TF found