CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_21000149
(
Cochliobolus heterostrophus C5
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pg.C_scaffold_21000149
T139000_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_21000149
C2H2 ZF
188
211
TRCPYRCRALLDTEELYVSHMRTH
fgenesh1_pg.C_scaffold_21000149
C2H2 ZF
216
241
YTCEAPGCSKVYVHMRTLRKHQRQAH
Links
Other
C2H2 ZF
family TFs
Other
Cochliobolus heterostrophus C5
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_64047
Bipolaris maydis
COCC4DRAFT_64047
N
0.827
COCCADRAFT_24941
Bipolaris zeicola
COCCADRAFT_24941
N
0.827
COCVIDRAFT_95073
Bipolaris victoriae
COCVIDRAFT_95073
N
0.827
COCSADRAFT_162023
Bipolaris sorokiniana
COCSADRAFT_162023
N
0.803
COCMIDRAFT_38680
Bipolaris oryzae
COCMIDRAFT_38680
N
0.797