fgenesh1_pg.sca_1_chr1_3_0000912 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh1_pg.sca_1_chr1_3_0000912 T139028_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SFP1
M01536_2.00 		Saccharomyces cerevisiae
WTTTTTTY
RAAAAAAW		 PBM
Zhu et al.(2009)
Sfp1 		0.777 0.822
SFP1
M08536_2.00 		Saccharomyces cerevisiae
NNNNDRAAAAWTTTTYYNBDN
NHVNRRAAAAWTTTTYHNNNN		 Misc
DeBoer et al.(2011)
YLR403W_797 		0.777 0.822
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_1_chr1_3_0000912 C2H2 ZF 554 579
fgenesh1_pg.sca_1_chr1_3_0000912 C2H2 ZF 615 636

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action