fgenesh1_pm.sca_14_chr10_3_0000034 (Nectria haematococca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 fgenesh1_pm.sca_14_chr10_3_0000034 T139059_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FGRRES_01877
M01175_2.00
Fusarium graminearum
NNNRGCTGNN

NNCAGCYNNN
PBM
Lambert et al.(2019)
pTH10260
0.827 1.000
NCU03699
M01878_2.00
Neurospora crassa
NNVRGCTGDN

NHCAGCYBNN
PBM
Weirauch et al.(2014)
pTH8956
0.822 0.976
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.sca_14_chr10_3_0000034 C2H2 ZF 270 291
fgenesh1_pm.sca_14_chr10_3_0000034 C2H2 ZF 298 324
fgenesh1_pm.sca_14_chr10_3_0000034 C2H2 ZF 329 359
fgenesh1_pm.sca_14_chr10_3_0000034 C2H2 ZF 392 411

Links

Other C2H2 ZF family TFs
Other Nectria haematococca TFs

Invalid Input OrderBy

89 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action