CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_5_chr5_3_0000410
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh1_pm.sca_5_chr5_3_0000410
T139064_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_5_chr5_3_0000410
C2H2 ZF
18
42
FQCNHEGCGRTYSRAEHLQRHQLNH
fgenesh1_pm.sca_5_chr5_3_0000410
C2H2 ZF
48
72
YYCDYPGCSFTFVRKDLYARHKLRH
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG93845
Fusarium solani
NechaG93845
N
0.827
FVEG_03915
Fusarium verticillioides
FVEG_03915
N
0.816
FOXG_06048
Fusarium oxysporum
FOXG_06048
N
0.816
FPSE_05078
Fusarium pseudograminearum
FPSE_05078
N
0.816
FGRRES_09368
Fusarium graminearum
FGRRES_09368
N
0.816
FFUJ_04220
Fusarium fujikuroi
FFUJ_04220
N
0.816
HMPREF1541_01987
Cyphellophora europaea
HMPREF1541_01987
N
0.772
PV10_09171
Exophiala mesophila
PV10_09171
N
0.755
A1O9_12637
Exophiala aquamarina
A1O9_12637
N
0.755