CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgeneshPB_pg.3__44
(
Phycomyces blakesleeanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgeneshPB_pg.3__44
T139975_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RO3G_06280
M01166_2.00
Rhizopus oryzae
NCGCCACHN
NDGTGGCGN
PBM
Lambert et al.(2019)
pTH10222
0.762
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgeneshPB_pg.3__44
C2H2 ZF
306
336
FVCEHPMGVSGRVCGQTFRRSYDLSRHQTIH
fgeneshPB_pg.3__44
C2H2 ZF
343
367
CRCHYCGKKFTRMDALRRHERVQGH
Links
Other
C2H2 ZF
family TFs
Other
Phycomyces blakesleeanus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RO3G_06280
Rhizopus oryzae
RO3G_06280
D
0.762
fgeneshMC_pg.4_#_1074
Mucor circinelloides
fgeneshMC_pg.4_#_1074
I
0.758