gw1.37.119.1 (Physcomitrella patens)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gw1.37.119.1 T140070_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.37.119.1 C2H2 ZF 109 131
gw1.37.119.1 C2H2 ZF 130 157

Links

Other C2H2 ZF family TFs
Other Physcomitrella patens TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.000
AT4G36590 Arabidopsis thaliana AT4G36590 N 0.000
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.000
Bostr.5325s0071 Boechera stricta Bostr.5325s0071 N 0.000
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.000
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.000
Ca_04659 Cicer arietinum Ca_04659 N 0.000
Ca_04660 Cicer arietinum Ca_04660 N 0.000
Ca_04661 Cicer arietinum Ca_04661 N 0.000
Ca_04665 Cicer arietinum Ca_04665 N 0.000
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.000
Cla006571 Citrullus lanatus Cla006571 N 0.000
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.000
evm.TU.contig_30689 Carica papaya evm.TU.contig_30689 N 0.000
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.000
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.000
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.000
evm.TU.supercontig_106.20 Carica papaya evm.TU.supercontig_106.20 N 0.000
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.000
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.000
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.000
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.000
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.000
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.000
LjSGA_067087.1 Lotus japonicus LjSGA_067087.1 N 0.000
LjSGA_082681.2 Lotus japonicus LjSGA_082681.2 N 0.000
LjSGA_120826.2 Lotus japonicus LjSGA_120826.2 N 0.000
LjT01D09.100.nd Lotus japonicus LjT01D09.100.nd N 0.000
MTR_1g075600 Medicago truncatula MTR_1g075600 N 0.000
MTR_1g077360 Medicago truncatula MTR_1g077360 N 0.000
MTR_1g108510 Medicago truncatula MTR_1g108510 N 0.000
MTR_2g085250 Medicago truncatula MTR_2g085250 N 0.000
MTR_2g085280 Medicago truncatula MTR_2g085280 N 0.000
MTR_3g030770 Medicago truncatula MTR_3g030770 N 0.000
MTR_5g055100 Medicago truncatula MTR_5g055100 N 0.000
Pm021071 Prunus mume Pm021071 N 0.000
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.000
TCM_006323 Theobroma cacao TCM_006323 N 0.000
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.000
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.000
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.000