CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22000576m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22000576m.g	T140354_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22000576m.p	C2H2 ZF	24	46	CLCNICGKSFSVGVTLTEHKRIH
Ocbimv22000576m.p	C2H2 ZF	52	74	YHCDICGISFSRNSNLIRHKHLH
Ocbimv22000576m.p	C2H2 ZF	80	102	YHCDVCGKSFSVSSNLITHKRTH
Ocbimv22000576m.p	C2H2 ZF	108	130	YHCDICGQSFSQKVSLTTHKYTH
Ocbimv22000576m.p	C2H2 ZF	136	158	YPCDICGKSFSLTGYLTIHKRTH
Ocbimv22000576m.p	C2H2 ZF	164	186	YHCDICGTSFARSSYLTSHKRTH
Ocbimv22000576m.p	C2H2 ZF	192	214	YHCDICGKSFSVNGYLPVHKRTH
Ocbimv22000576m.p	C2H2 ZF	220	242	YHCNVCGKSFSQNSYLTIHKYTH
Ocbimv22000576m.p	C2H2 ZF	248	270	YHCDICGKSFSVNSNLTKHKDIH
Ocbimv22000576m.p	C2H2 ZF	276	298	YYCDVCGKSFAQKRYLNVHKRVH
Ocbimv22000576m.p	C2H2 ZF	304	326	YHCNICGKSFLRKAKVTVHKRIH
Ocbimv22000576m.p	C2H2 ZF	332	354	YHCDICGRSFAESGTLAIHKRLH
Ocbimv22000576m.p	C2H2 ZF	360	382	YSCDICGKSFSYNGILINHKRLH
Ocbimv22000576m.p	C2H2 ZF	388	410	YHCDVCGKSFTESNNLTVHKRVH
Ocbimv22000576m.p	C2H2 ZF	416	438	YRCDVCGKSFSQNGNLTVHKRVH
Ocbimv22000576m.p	C2H2 ZF	444	466	YCCHICGKSFSQNHCLNIHKRTH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found