CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22001309m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22001309m.g
T140378_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22001309m.p
C2H2 ZF
9
31
YRCDVCGELFTSNANLTSHKRTH
Ocbimv22001309m.p
C2H2 ZF
37
59
FQCDTCGKAFSTRSSVSRHQVSH
Ocbimv22001309m.p
C2H2 ZF
65
87
YRCDICGKAFSYNSGLRAHIHIH
Ocbimv22001309m.p
C2H2 ZF
93
115
YHCDVCGKSFSSSSILSDHSHIH
Ocbimv22001309m.p
C2H2 ZF
119
141
FRCDICGKGFSRKRLLVFHKDKH
Ocbimv22001309m.p
C2H2 ZF
147
169
YHCEFCGKSFYVKSQLSVHKFIH
Ocbimv22001309m.p
C2H2 ZF
175
197
YSCDICGKTFPKKIRLTYHKIIH
Ocbimv22001309m.p
C2H2 ZF
203
225
YKCDICGKCFSRKAYMKCHRLTH
Ocbimv22001309m.p
C2H2 ZF
230
252
YHCEICGKAFSHSSNLAAHKRLH
Ocbimv22001309m.p
C2H2 ZF
258
280
YHCDVCGKAFSRNSNLSRHKRSH
Ocbimv22001309m.p
C2H2 ZF
286
308
YQCEFCEKAFHRKSHLAEHRRIH
Ocbimv22001309m.p
C2H2 ZF
314
336
YQCQICEKTFYRKDHLADHTRIH
Ocbimv22001309m.p
C2H2 ZF
342
364
YQCEICDKAFSTSSHLSDHIRIH
Ocbimv22001309m.p
C2H2 ZF
370
392
YQCEICGEAFSRNRNLLRHKPIH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
0 Related TFs
">No related TF found