CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22002045m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22002045m.g	T140405_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22002045m.p	C2H2 ZF	35	57	HYCIICNKSFSRKGNLTTHKRVH
Ocbimv22002045m.p	C2H2 ZF	63	85	YNCYICHKSFSQESSLTTHKRIH
Ocbimv22002045m.p	C2H2 ZF	91	113	YRCDICGKLFSHGITLTNHKRIH
Ocbimv22002045m.p	C2H2 ZF	119	141	YLCDICGKSFSQESALTTHKRIH
Ocbimv22002045m.p	C2H2 ZF	147	169	YQCDICGKSFSARSQSATHKRIH
Ocbimv22002045m.p	C2H2 ZF	175	197	HHCDICGKSYFTRSHLTAHRRIH
Ocbimv22002045m.p	C2H2 ZF	203	225	YHCDICGKSFSVGTKLNKHKYIH
Ocbimv22002045m.p	C2H2 ZF	231	253	YHCDMCGKSFSDGGNLTKHKYIH
Ocbimv22002045m.p	C2H2 ZF	259	281	YHCDICGKSFFQRVHLTTHRRSH
Ocbimv22002045m.p	C2H2 ZF	287	309	YHCDICGKSFSERSYITTHKRIH
Ocbimv22002045m.p	C2H2 ZF	315	338	YHCNICGKSFSQTSELTTHNRRIH
Ocbimv22002045m.p	C2H2 ZF	351	373	YQCDICGKLFSEPSYLTCHKHIH
Ocbimv22002045m.p	C2H2 ZF	379	401	YHCDICGKSFSAKSYLSKHRHIH
Ocbimv22002045m.p	C2H2 ZF	407	429	FHCDICGISFSQAGHLTTHKRIH
Ocbimv22002045m.p	C2H2 ZF	435	457	YNCGVCGKSFSQTSHLTIHRRIH
Ocbimv22002045m.p	C2H2 ZF	463	485	YHCDICGKSFYQNSDVTKHKRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found