CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22004421m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22004421m.g
T140478_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.778
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22004421m.p
C2H2 ZF
233
255
LHCVLCRRGFNSRSNLRSHMRIH
Ocbimv22004421m.p
C2H2 ZF
261
283
FVCKFCNRSFSQSSTLRNHTRLH
Ocbimv22004421m.p
C2H2 ZF
289
313
YRCTVCQSSYSQLAGLRAHQRSSRH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSPSIG00000006739
Pelodiscus sinensis
ENSPSIG00000006739
I
0.778
ENSPPYG00000019694
Pongo abelii
ENSPPYG00000019694
I
0.778
PRDM12
Pan troglodytes
ENSPTRG00000021475
I
0.778
PRDM12
Pteropus vampyrus
ENSPVAG00000001511
I
0.778
Prdm12
Rattus norvegicus
ENSRNOG00000009218
I
0.778
ENSPFOG00000019841
Poecilia formosa
ENSPFOG00000019841
I
0.778
ENSPANG00000025967
Papio anubis
ENSPANG00000025967
I
0.778
PRDM12
Otolemur garnettii
ENSOGAG00000007557
I
0.778
ENSONIG00000002871
Oreochromis niloticus
ENSONIG00000002871
I
0.778
prdm12b
Oryzias latipes
ENSORLG00000007114
I
0.778
ENSORLG00000017558
Oryzias latipes
ENSORLG00000017558
I
0.778
ENSSHAG00000015972
Sarcophilus harrisii
ENSSHAG00000015972
I
0.778
PRDM12
Sus scrofa
ENSSSCG00000005703
I
0.778
Ogr15453
Ophisaurus gracilis
Ogr15453
I
0.778
Pvit_04639
Pogona vitticeps
Pvit_04639
I
0.778
prdm12
Xenopus tropicalis
XB-GENE-953729
I
0.778
prdm12.L
Xenopus laevis
XB-GENE-953734
I
0.778
Alligator_sinensis_CCG011983.1
Alligator sinensis
Alligator_sinensis_CCG011983.1
I
0.778
ENSXMAG00000005537
Xiphophorus maculatus
ENSXMAG00000005537
I
0.778
ENSSTOG00000005986
Ictidomys tridecemlineatus
ENSSTOG00000005986
I
0.778
ENSTNIG00000005859
Tetraodon nigroviridis
ENSTNIG00000005859
I
0.778
ENSTRUG00000013239
Takifugu rubripes
ENSTRUG00000013239
I
0.778
prdm12b
Takifugu rubripes
ENSTRUG00000018659
I
0.778
PRDM12
Oryctolagus cuniculus
ENSOCUG00000008241
I
0.778
PRDM12
Ochotona princeps
ENSOPRG00000008680
I
0.778
prdm12b
Danio rerio
ENSDARG00000007430
I
0.778
ENSCSAG00000014756
Chlorocebus sabaeus
ENSCSAG00000014756
I
0.778
PRDM12
Dasypus novemcinctus
ENSDNOG00000042302
I
0.778
ENSOANG00000001043
Ornithorhynchus anatinus
ENSOANG00000001043
I
0.778
PRDM12
Homo sapiens
ENSG00000130711
D
0.778
PRDM12
Canis familiaris
ENSCAFG00000023076
I
0.778
PRDM12
Bos taurus
ENSBTAG00000023797
I
0.778
ENSAMEG00000016234
Ailuropoda melanoleuca
ENSAMEG00000016234
I
0.778
ENSAMXG00000007663
Astyanax mexicanus
ENSAMXG00000007663
I
0.778
ENSAMXG00000008540
Astyanax mexicanus
ENSAMXG00000008540
I
0.778
ENSAPLG00000012403
Anas platyrhynchos
ENSAPLG00000012403
I
0.778
prdm12b
Gasterosteus aculeatus
ENSGACG00000016713
I
0.778
ENSFALG00000001445
Ficedula albicollis
ENSFALG00000001445
I
0.778
PRDM12
Gallus gallus
ENSGALG00000003895
I
0.778
PRDM12
Meleagris gallopavo
ENSMGAG00000005438
I
0.778
PRDM12
Microcebus murinus
ENSMICG00000015480
I
0.778
PRDM12
Monodelphis domestica
ENSMODG00000012108
I
0.778
Prdm12
Mus musculus
ENSMUSG00000079466
I
0.778
ENSMEUG00000003828
Macropus eugenii
ENSMEUG00000003828
I
0.778
ENSLACG00000017560
Latimeria chalumnae
ENSLACG00000017560
I
0.778
ENSGMOG00000011797
Gadus morhua
ENSGMOG00000011797
I
0.778
PRDM12
Loxodonta africana
ENSLAFG00000006979
I
0.778
ENSLOCG00000005429
Lepisosteus oculatus
ENSLOCG00000005429
I
0.778
fgenesh2_pg.scaffold_504000008
Branchiostoma floridae
fgenesh2_pg.scaffold_504000008
I
0.777
gw.504.9.1
Branchiostoma floridae
gw.504.9.1
I
0.777
CGI_10016801
Crassostrea gigas
CGI_10016801
I
0.775
Sakowv30035316m.g
Saccoglossus kowalevskii
Sakowv30035316m.g
I
0.774
NEMVEDRAFT_v1g119550
Nematostella vectensis
NEMVEDRAFT_v1g119550
I
0.768
LotgiG130157
Lottia gigantea
LotgiG130157
I
0.761
TriadG14897
Trichoplax adhaerens
TriadG14897
I
0.757