CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22004421m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22004421m.g
T140478_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PRDM12
M10213_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRDM12_01
0.778
0.841
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22004421m.p
C2H2 ZF
233
255
LHCVLCRRGFNSRSNLRSHMRIH
Ocbimv22004421m.p
C2H2 ZF
261
283
FVCKFCNRSFSQSSTLRNHTRLH
Ocbimv22004421m.p
C2H2 ZF
289
313
YRCTVCQSSYSQLAGLRAHQRSSRH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy