CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22005411m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22005411m.g
T140513_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22005411m.p
C2H2 ZF
38
63
FECHWAECDKKFVFLDKLVHHVNEQH
Ocbimv22005411m.p
C2H2 ZF
73
100
YQCKWTDCLRHGKGFNSRYKMLIHIRTH
Ocbimv22005411m.p
C2H2 ZF
106
128
HNCSLCGKSFSRLENLKIHKRSH
Ocbimv22005411m.p
C2H2 ZF
134
158
YACPVDGCLKAYSNSSDRFKHIRTH
Ocbimv22005411m.p
C2H2 ZF
164
190
YVCKIPGCNKRYTDPSSLRKHVRTYGH
Ocbimv22005412m.p
C2H2 ZF
38
63
FECHWAECDKKFVFLDKLVHHVNEQH
Ocbimv22005412m.p
C2H2 ZF
73
100
YQCKWTDCLRHGKGFNSRYKMLIHIRTH
Ocbimv22005412m.p
C2H2 ZF
106
128
HNCSLCGKSFSRLENLKIHKRSH
Ocbimv22005412m.p
C2H2 ZF
134
158
YACPVDGCLKAYSNSSDRFKHIRTH
Ocbimv22005412m.p
C2H2 ZF
164
190
YVCKIPGCNKRYTDPSSLRKHVRTYGH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action