CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22006206m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22006206m.g	T140579_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22006206m.p	C2H2 ZF	30	52	YMCDICGKFFKFRRHLIRHQSVH
Ocbimv22006206m.p	C2H2 ZF	58	80	YKCNVCGKTYSLNSSLYKHKLSH
Ocbimv22006206m.p	C2H2 ZF	86	108	YHCDICGQNFSVKYSLTLHKRIH
Ocbimv22006206m.p	C2H2 ZF	114	136	YHCDICGKRFSVSSSVAVHKVIH
Ocbimv22006206m.p	C2H2 ZF	142	164	YKCDFCGKAFSFSSYLSKHKRLH
Ocbimv22006206m.p	C2H2 ZF	170	192	CCCDICGKTFTQISHLKTHTRVH
Ocbimv22006206m.p	C2H2 ZF	198	220	YHCDVCGKKFSTNEHLSSHKYVH
Ocbimv22006206m.p	C2H2 ZF	226	248	YHCDICGKAFPRSGNLKIHKFLH
Ocbimv22006206m.p	C2H2 ZF	254	276	YHCDICGKNFSTNDYLSNHKRIH
Ocbimv22006206m.p	C2H2 ZF	282	304	CRCDICGKAFSRNRDLLTHNRIH
Ocbimv22006206m.p	C2H2 ZF	310	332	YHCDVCGKSFTISGHLTKHKRIH
Ocbimv22006206m.p	C2H2 ZF	338	360	FHCSICGKNFARSGYLSQHRRIH
Ocbimv22006206m.p	C2H2 ZF	366	388	FHCDICGKNFALSGSLTKHKRIH
Ocbimv22006206m.p	C2H2 ZF	394	416	FHCDICGKTFSESSSVISHKRVH
Ocbimv22006206m.p	C2H2 ZF	422	444	YHCDICGKTFTASNSLSAHQTIH
Ocbimv22006206m.p	C2H2 ZF	450	472	YGCDVCGKAFSRSGNLLRHKHIH
Ocbimv22006206m.p	C2H2 ZF	478	500	YQCSICDKTFSCSSYLDKHKRVH
Ocbimv22006206m.p	C2H2 ZF	506	528	YPCDICGKSFSQNNHLLNHRHIH
Ocbimv22006206m.p	C2H2 ZF	534	556	YHCDLCGKAFSQQSTLSVHKRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found