CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22008869m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22008869m.g	T140738_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22008869m.p	C2H2 ZF	32	46	KPYCSEIFTTKSNLK
Ocbimv22008869m.p	C2H2 ZF	58	80	YQCKECGKNFTRNSSLYRHQLIH
Ocbimv22008869m.p	C2H2 ZF	86	108	YHCDICGRKFSRESSLRTHKYTH
Ocbimv22008869m.p	C2H2 ZF	114	136	FHCDVCGKKFTGSSDLTYHKRTH
Ocbimv22008869m.p	C2H2 ZF	142	164	YQCDICDKRFIANKDLSRHKFIH
Ocbimv22008869m.p	C2H2 ZF	170	192	YHCDICGKSFTRNSSLYKHLHIH
Ocbimv22008869m.p	C2H2 ZF	199	221	FQCNICGKAFLDNTHLTRHTRTH
Ocbimv22008869m.p	C2H2 ZF	227	249	YQCDICDKAFSGSSGLFSHKRIH
Ocbimv22008869m.p	C2H2 ZF	255	277	YPCDICGKSFSTSSNLNSHKRSH
Ocbimv22008869m.p	C2H2 ZF	283	305	YHCDFCDKTFSMCSSLSNHKHIH
Ocbimv22008869m.p	C2H2 ZF	311	333	YCCDICGKTFSTKSHLNRHLHIH
Ocbimv22008869m.p	C2H2 ZF	340	362	YQCNICSKTFSESTNLTRHIRIH
Ocbimv22008869m.p	C2H2 ZF	368	390	FRCGTCDKTFTSSASLSYHKRTH
Ocbimv22008869m.p	C2H2 ZF	396	418	YHCDICGKSFSVSSNLYTHKRTH
Ocbimv22008869m.p	C2H2 ZF	424	445	HCDICGKSFSVANSLYAHKRTH
Ocbimv22008869m.p	C2H2 ZF	451	473	YHCDICDKSFSVKCSLTNHKRIH
Ocbimv22008869m.p	C2H2 ZF	479	501	YSCGVCGRTFSRSSFLSTHKRLH
Ocbimv22008869m.p	C2H2 ZF	507	529	YSCNICGKSFSAASGLYCHKGTH
Ocbimv22008869m.p	C2H2 ZF	535	557	HRCKICGKSFSSASGLYCHKQTH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found