CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22012499m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22012499m.g
T140846_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22012498m.p
C2H2 ZF
219
241
SYCEYCGKYFAQEYVLQMHRRTH
Ocbimv22012498m.p
C2H2 ZF
247
269
YQCEFCLKQFARRDTLQVHRRTH
Ocbimv22012498m.p
C2H2 ZF
275
297
YQCDVCFQYFAQRDYLVVHKRSH
Ocbimv22012498m.p
C2H2 ZF
303
325
FQCDFCIQKFARRDTLQIHRRIH
Ocbimv22012498m.p
C2H2 ZF
331
353
FQCDVCLKQFAQRDKLHTHQRTH
Ocbimv22012498m.p
C2H2 ZF
359
381
FHCDICLKQFAHRDYLQIHRRSH
Ocbimv22012498m.p
C2H2 ZF
387
409
FQCDFCIQKFSRKDTLQIHRRIH
Ocbimv22012498m.p
C2H2 ZF
415
437
FHCDICGKRFAQTDKLRRHKRTH
Ocbimv22012499m.p
C2H2 ZF
219
241
SYCEYCGKYFAQEYVLQMHRRTH
Ocbimv22012499m.p
C2H2 ZF
247
269
YQCEFCLKQFARRDTLQVHRRTH
Ocbimv22012499m.p
C2H2 ZF
275
297
YQCDVCFQYFAQRDYLVVHKRSH
Ocbimv22012499m.p
C2H2 ZF
303
325
FQCDFCIQKFARRDTLQIHRRIH
Ocbimv22012499m.p
C2H2 ZF
331
353
FQCDVCLKQFAQRDKLHTHQRTH
Ocbimv22012499m.p
C2H2 ZF
359
381
FHCDICLKQFAHRDYLQIHRRSH
Ocbimv22012499m.p
C2H2 ZF
387
409
FQCDFCIQKFSRKDTLQIHRRIH
Ocbimv22012499m.p
C2H2 ZF
415
437
FHCDICGKRFAQTDKLRRHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action