Ocbimv22014778m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22014778m.g T140954_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM

KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.757 0.885
GLIS3
M10169_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.757 0.885
GLIS3
M10170_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.757 0.885
GLIS3
M10171_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.757 0.885
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22014778m.p C2H2 ZF 351 375
Ocbimv22014778m.p C2H2 ZF 384 411
Ocbimv22014778m.p C2H2 ZF 418 441
Ocbimv22014778m.p C2H2 ZF 447 471
Ocbimv22014778m.p C2H2 ZF 477 501

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CapteG111854 Capitella teleta CapteG111854 N 0.803
Brh_R013214 Buceros rhinoceros Brh_R013214 I 0.801
ENSGALG00000010721 Gallus gallus ENSGALG00000010721 I 0.801
Gfo_R010168 Geospiza fortis Gfo_R010168 I 0.801
GLIS1 Meleagris gallopavo ENSMGAG00000011303 I 0.801
Aan_R004053 Calypte anna Aan_R004053 I 0.801
GLIS1 Taeniopygia guttata ENSTGUG00000009294 I 0.801
ENSPSIG00000002846 Pelodiscus sinensis ENSPSIG00000002846 I 0.801
ENSFALG00000011974 Ficedula albicollis ENSFALG00000011974 I 0.801
Afo_R001041 Aptenodytes forsteri Afo_R001041 I 0.801
ENSLACG00000012147 Latimeria chalumnae ENSLACG00000012147 I 0.801
Tal_R012308 Tyto alba Tal_R012308 I 0.801
Pvit_11533 Pogona vitticeps Pvit_11533 I 0.801
ENSAPLG00000013972 Anas platyrhynchos ENSAPLG00000013972 I 0.801
LotgiG55425 Lottia gigantea LotgiG55425 N 0.796
ENSTNIG00000009052 Tetraodon nigroviridis ENSTNIG00000009052 N 0.779
SPU_018744 Strongylocentrotus purpuratus SPU_018744 I 0.772
Sakowv30037345m.g Saccoglossus kowalevskii Sakowv30037345m.g I 0.765
ENSAMXG00000005278 Astyanax mexicanus ENSAMXG00000005278 I 0.764
gw.28.157.1 Branchiostoma floridae gw.28.157.1 I 0.763
e_gw.471.22.1 Branchiostoma floridae e_gw.471.22.1 I 0.763
ENSTSYG00000000686 Tarsius syrichta ENSTSYG00000000686 I 0.757
Pvit_10484 Pogona vitticeps Pvit_10484 I 0.757
Ogr17806 Ophisaurus gracilis Ogr17806 I 0.757
ENSSTOG00000000302 Ictidomys tridecemlineatus ENSSTOG00000000302 I 0.757
ENSP00000371398 Macaca fascicularis ENSP00000371398 I 0.757
Myotis_brandtii_GLIS3_10023567 Myotis brandtii Myotis_brandtii_GLIS3_10023567 I 0.757
Afo_R016063 Aptenodytes forsteri Afo_R016063 I 0.757
Aan_R004381 Calypte anna Aan_R004381 I 0.757
ENSPANG00000025157 Papio anubis ENSPANG00000025157 I 0.757
GLIS3 Equus caballus ENSECAG00000020544 I 0.757
GLIS3 Echinops telfairi ENSETEG00000015977 I 0.757
GLIS3 Homo sapiens ENSG00000107249 D 0.757
GLIS3 Gallus gallus ENSGALG00000010180 I 0.757
GLIS3 Cavia porcellus ENSCPOG00000005523 I 0.757
GLIS3 Callithrix jacchus ENSCJAG00000011083 I 0.757
GLIS3 Anolis carolinensis ENSACAG00000003374 I 0.757
ENSAPLG00000014844 Anas platyrhynchos ENSAPLG00000014844 I 0.757
GLIS3 Canis familiaris ENSCAFG00000031499 I 0.757
ENSLOCG00000012972 Lepisosteus oculatus ENSLOCG00000012972 I 0.757
ENSMEUG00000005102 Macropus eugenii ENSMEUG00000005102 I 0.757
GLIS3 Otolemur garnettii ENSOGAG00000007376 I 0.757
ENSPSIG00000005966 Pelodiscus sinensis ENSPSIG00000005966 I 0.757
GLIS3 Pteropus vampyrus ENSPVAG00000001839 I 0.757
ENSOANG00000014997 Ornithorhynchus anatinus ENSOANG00000014997 I 0.757
ENSNLEG00000008824 Nomascus leucogenys ENSNLEG00000008824 I 0.757
GLIS3 Monodelphis domestica ENSMODG00000015403 I 0.757
ENSMPUG00000005095 Mustela putorius furo ENSMPUG00000005095 I 0.757
Glis3 Mus musculus ENSMUSG00000052942 I 0.757
Glis3 Rattus norvegicus ENSRNOG00000014768 I 0.757