CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22014778m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22014778m.g
T140954_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.757
0.885
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.757
0.885
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.757
0.885
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.757
0.885
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22014778m.p
C2H2 ZF
351
375
ICKWIDCNLLFTEQDELVRHIEKVH
Ocbimv22014778m.p
C2H2 ZF
384
411
FTCFWQGCQRRLKPFNARYKLLIHMRVH
Ocbimv22014778m.p
C2H2 ZF
418
441
KCTYEGCNKAFSRLENLKIHLRSH
Ocbimv22014778m.p
C2H2 ZF
447
471
YLCQFSECQKAFSNSSDRAKHQRTH
Ocbimv22014778m.p
C2H2 ZF
477
501
YACQVVGCTKRYTDPSSLRKHFKNH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG111854
Capitella teleta
CapteG111854
N
0.803
Brh_R013214
Buceros rhinoceros
Brh_R013214
I
0.801
ENSGALG00000010721
Gallus gallus
ENSGALG00000010721
I
0.801
Gfo_R010168
Geospiza fortis
Gfo_R010168
I
0.801
GLIS1
Meleagris gallopavo
ENSMGAG00000011303
I
0.801
Aan_R004053
Calypte anna
Aan_R004053
I
0.801
GLIS1
Taeniopygia guttata
ENSTGUG00000009294
I
0.801
ENSPSIG00000002846
Pelodiscus sinensis
ENSPSIG00000002846
I
0.801
ENSFALG00000011974
Ficedula albicollis
ENSFALG00000011974
I
0.801
Afo_R001041
Aptenodytes forsteri
Afo_R001041
I
0.801
ENSLACG00000012147
Latimeria chalumnae
ENSLACG00000012147
I
0.801
Tal_R012308
Tyto alba
Tal_R012308
I
0.801
Pvit_11533
Pogona vitticeps
Pvit_11533
I
0.801
ENSAPLG00000013972
Anas platyrhynchos
ENSAPLG00000013972
I
0.801
LotgiG55425
Lottia gigantea
LotgiG55425
N
0.796
ENSTNIG00000009052
Tetraodon nigroviridis
ENSTNIG00000009052
N
0.779
SPU_018744
Strongylocentrotus purpuratus
SPU_018744
I
0.772
Sakowv30037345m.g
Saccoglossus kowalevskii
Sakowv30037345m.g
I
0.765
ENSAMXG00000005278
Astyanax mexicanus
ENSAMXG00000005278
I
0.764
gw.28.157.1
Branchiostoma floridae
gw.28.157.1
I
0.763
e_gw.471.22.1
Branchiostoma floridae
e_gw.471.22.1
I
0.763
ENSTSYG00000000686
Tarsius syrichta
ENSTSYG00000000686
I
0.757
Pvit_10484
Pogona vitticeps
Pvit_10484
I
0.757
Ogr17806
Ophisaurus gracilis
Ogr17806
I
0.757
ENSSTOG00000000302
Ictidomys tridecemlineatus
ENSSTOG00000000302
I
0.757
ENSP00000371398
Macaca fascicularis
ENSP00000371398
I
0.757
Myotis_brandtii_GLIS3_10023567
Myotis brandtii
Myotis_brandtii_GLIS3_10023567
I
0.757
Afo_R016063
Aptenodytes forsteri
Afo_R016063
I
0.757
Aan_R004381
Calypte anna
Aan_R004381
I
0.757
ENSPANG00000025157
Papio anubis
ENSPANG00000025157
I
0.757
GLIS3
Equus caballus
ENSECAG00000020544
I
0.757
GLIS3
Echinops telfairi
ENSETEG00000015977
I
0.757
GLIS3
Homo sapiens
ENSG00000107249
D
0.757
GLIS3
Gallus gallus
ENSGALG00000010180
I
0.757
GLIS3
Cavia porcellus
ENSCPOG00000005523
I
0.757
GLIS3
Callithrix jacchus
ENSCJAG00000011083
I
0.757
GLIS3
Anolis carolinensis
ENSACAG00000003374
I
0.757
ENSAPLG00000014844
Anas platyrhynchos
ENSAPLG00000014844
I
0.757
GLIS3
Canis familiaris
ENSCAFG00000031499
I
0.757
ENSLOCG00000012972
Lepisosteus oculatus
ENSLOCG00000012972
I
0.757
ENSMEUG00000005102
Macropus eugenii
ENSMEUG00000005102
I
0.757
GLIS3
Otolemur garnettii
ENSOGAG00000007376
I
0.757
ENSPSIG00000005966
Pelodiscus sinensis
ENSPSIG00000005966
I
0.757
GLIS3
Pteropus vampyrus
ENSPVAG00000001839
I
0.757
ENSOANG00000014997
Ornithorhynchus anatinus
ENSOANG00000014997
I
0.757
ENSNLEG00000008824
Nomascus leucogenys
ENSNLEG00000008824
I
0.757
GLIS3
Monodelphis domestica
ENSMODG00000015403
I
0.757
ENSMPUG00000005095
Mustela putorius furo
ENSMPUG00000005095
I
0.757
Glis3
Mus musculus
ENSMUSG00000052942
I
0.757
Glis3
Rattus norvegicus
ENSRNOG00000014768
I
0.757