CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22015306m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22015306m.g	T140981_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22015306m.p	C2H2 ZF	10	32	HHCDICGKLFSESHKLTTHKYTH
Ocbimv22015306m.p	C2H2 ZF	38	61	YNCDVCGKSFLHKSSLSRHKRIVH
Ocbimv22015306m.p	C2H2 ZF	67	89	YHCDICGKSFNQNGDLNKHKYIH
Ocbimv22015306m.p	C2H2 ZF	95	117	FYCNICGKSFFESCNLTTHKRIH
Ocbimv22015306m.p	C2H2 ZF	123	145	YHCNICGKSFLQNQHLTNHIRSH
Ocbimv22015306m.p	C2H2 ZF	151	174	YHCDICGKSFSQNQHLTEHKRIIH
Ocbimv22015306m.p	C2H2 ZF	180	202	YHCDVCGKSFSFNRHLTKHNRIH
Ocbimv22015306m.p	C2H2 ZF	208	229	FYCNICDKSFSENSELTSHKHI
Ocbimv22015306m.p	C2H2 ZF	236	258	YHCDICGKSFSIDYVLNKHKRIH
Ocbimv22015306m.p	C2H2 ZF	264	286	YHCDICGKSYFDNYHLTEHKRIH
Ocbimv22015306m.p	C2H2 ZF	292	314	YHCGDCGKSFTGRGSFTRHTRIH
Ocbimv22015306m.p	C2H2 ZF	320	342	YCCDICGKSFTVSSSLIKHRRTH
Ocbimv22015306m.p	C2H2 ZF	348	370	YHCDICGKSYSDNLNLTEHRRIH
Ocbimv22015306m.p	C2H2 ZF	376	398	YHCDVCGKSFTGSSHLRIHLRIH
Ocbimv22015306m.p	C2H2 ZF	404	426	YCCDICGKSFSVRSGITYHKRIH
Ocbimv22015306m.p	C2H2 ZF	432	454	YRCDICGNSFSQNQHLVDHKRIH
Ocbimv22015306m.p	C2H2 ZF	460	482	YCCNICGKTFLRRGEITIHKRMH
Ocbimv22015306m.p	C2H2 ZF	488	510	YHCDICGKSFYVKSTLTKHKRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found