CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22016050m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22016050m.g	T141039_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22016050m.p	C2H2 ZF	12	34	YHCDICGKSFTTNINVTVHKRTH
Ocbimv22016050m.p	C2H2 ZF	40	62	YHCDICGNSFSQRCALTIHKRIH
Ocbimv22016050m.p	C2H2 ZF	68	90	YHCDICGKSFSCRAQVIAHKRIH
Ocbimv22016050m.p	C2H2 ZF	96	118	YNCGVCGKSFSESCQLTKHIRIH
Ocbimv22016050m.p	C2H2 ZF	124	146	YQCDICGKSFSHSPDLTTHKRTH
Ocbimv22016050m.p	C2H2 ZF	152	174	YHCDICGKSFSQNRNVTVHKRTH
Ocbimv22016050m.p	C2H2 ZF	180	202	YNCDVCGKSFSNNSILTQHKRIH
Ocbimv22016050m.p	C2H2 ZF	208	230	YHCDICGKSFSCSSHVIAHKRIH
Ocbimv22016050m.p	C2H2 ZF	236	258	YNCDVCGKLFSENGALTKHIRIH
Ocbimv22016050m.p	C2H2 ZF	264	286	YQCDICGKSFSHSRYLTTHKRTH
Ocbimv22016050m.p	C2H2 ZF	292	314	YHCDVCGKSFSRIALVISHKRIH
Ocbimv22016050m.p	C2H2 ZF	320	342	YNCDDCGKSFSNNGILTAHKRIH
Ocbimv22016050m.p	C2H2 ZF	348	370	YHCDICGKLFSRNSNLTKHIRIH
Ocbimv22016050m.p	C2H2 ZF	376	398	HHCDICGKSFSHSPNLTTHRRTH
Ocbimv22016050m.p	C2H2 ZF	404	426	YHCDVCGKSFSINSTLTAHKRTH
Ocbimv22016050m.p	C2H2 ZF	431	451	VNDCDKLFSKSCYMTVHKRTH
Ocbimv22016050m.p	C2H2 ZF	457	479	YHCDICGKSFSRNIQLTGHKRTH
Ocbimv22016050m.p	C2H2 ZF	485	506	YHCDICSKSFSHSFLTTHKRTH
Ocbimv22016050m.p	C2H2 ZF	512	526	YHCHICGKSLSQNCN

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found