CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22016491m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22016491m.g	T141069_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22016491m.p	C2H2 ZF	24	46	YDCDVCNKSFSQKRNLTTHKHIH
Ocbimv22016491m.p	C2H2 ZF	52	74	YHCDICGKSFIYHSNIAKHKRIH
Ocbimv22016491m.p	C2H2 ZF	81	102	HCDICNKSFSQKSNLYSHKRIH
Ocbimv22016491m.p	C2H2 ZF	108	130	YYCDICGQSFSQSSKLTPHKRIH
Ocbimv22016491m.p	C2H2 ZF	136	158	YHCDICGKSFSVNNTLIVHMRVH
Ocbimv22016491m.p	C2H2 ZF	164	186	YHCDICGTSFSQSSHLTTHRRIH
Ocbimv22016491m.p	C2H2 ZF	192	214	YQCVVCGRLFSHSNHLTKHKRIH
Ocbimv22016491m.p	C2H2 ZF	220	242	YHCDICGKSFSQNSTLISHRRIH
Ocbimv22016491m.p	C2H2 ZF	248	270	FHCDICDKSFTKRSALTAHKHIH
Ocbimv22016491m.p	C2H2 ZF	276	298	YQCDICGKSFSQNGNLAQHKFFH
Ocbimv22016491m.p	C2H2 ZF	304	326	YHCDVCGKLFSNSSHLTRHKFIH
Ocbimv22016491m.p	C2H2 ZF	332	354	YQCDICSKSFSQNSTLTSHRRIH
Ocbimv22016491m.p	C2H2 ZF	360	382	YHCEICGKLFSQNSDLTKHNRIH
Ocbimv22016491m.p	C2H2 ZF	388	410	YHCDICGKLFSNSSHLTRHKRIH
Ocbimv22016491m.p	C2H2 ZF	416	438	YRCNICSKSFSQNSHLTVHTRIH
Ocbimv22016491m.p	C2H2 ZF	444	466	YHCDICGKSFSQNSSLTKHKCIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found