CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22018867m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22018867m.g	T141167_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22018867m.p	C2H2 ZF	5	27	YLCNICGLSFCKNSYLTTHKRIH
Ocbimv22018867m.p	C2H2 ZF	33	55	YYCDICGKSFSQSGSLTKHKHIH
Ocbimv22018867m.p	C2H2 ZF	61	83	YHCDICGKSFTEGNSLTTHKRIH
Ocbimv22018867m.p	C2H2 ZF	89	111	YHCNICGKSFSRNDYLTNHTRIH
Ocbimv22018867m.p	C2H2 ZF	117	139	YRCDICGKSFPQTCRLSTHKRIH
Ocbimv22018867m.p	C2H2 ZF	145	167	YHCDICGKSFPQTCGLSTHKRIH
Ocbimv22018867m.p	C2H2 ZF	173	195	YHCDICGKSFSVNSTLTKHIRIH
Ocbimv22018867m.p	C2H2 ZF	201	223	YCCDICDKSFSDYSSLTAHRRIH
Ocbimv22018867m.p	C2H2 ZF	229	251	YNCDICGKSFSRNYHLITHKRTH
Ocbimv22018867m.p	C2H2 ZF	257	279	YHCDICGKSFSQNEHLISHKRIH
Ocbimv22018867m.p	C2H2 ZF	285	307	YHCDVCGKSFSGSNNFANHKRIH
Ocbimv22018867m.p	C2H2 ZF	313	335	YQCNICEKSFSVRSNLITHKRIH
Ocbimv22018867m.p	C2H2 ZF	341	363	YHCDICGKSFSRKYHLTTHERIH
Ocbimv22018867m.p	C2H2 ZF	369	391	YHCDICGKSFHAGSNLTTHKRIH
Ocbimv22018867m.p	C2H2 ZF	397	419	YQCDICGKSFSQSSESNTHKRIH
Ocbimv22018867m.p	C2H2 ZF	425	447	YQCDICGKSFSRNDQLAAHRHIH
Ocbimv22018867m.p	C2H2 ZF	453	475	YHCYICSKSFSRKSLLSTHECIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found