CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Ocbimv22019416m.g *(Octopus bimaculoides)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Ocbimv22019416m.g	T141194_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Ocbimv22019416m.p	C2H2 ZF	13	35	HYCEVCGKGFTRNSLLTRHKHIH
Ocbimv22019416m.p	C2H2 ZF	41	63	YHCDICGEKFSRSAHLSRHRHIH
Ocbimv22019416m.p	C2H2 ZF	69	91	YPCDVCGKTFSQSGTLSTHKHIH
Ocbimv22019416m.p	C2H2 ZF	97	119	YQCDICDDRFSTRGQLSNHKRIH
Ocbimv22019416m.p	C2H2 ZF	125	147	YQCDICSKTFSRSGHLSSHKLIH
Ocbimv22019416m.p	C2H2 ZF	153	175	YQCDICDKTFSRSGDLSSHKHIH
Ocbimv22019416m.p	C2H2 ZF	181	203	YHCDICGTTFSQSGSLSQHKRIH
Ocbimv22019416m.p	C2H2 ZF	209	231	YQCDICDKTFSTKSHLSSHIRTH
Ocbimv22019416m.p	C2H2 ZF	237	259	YHCDICGKTFTQSGSLSQHKPIH
Ocbimv22019416m.p	C2H2 ZF	265	287	YNCDICGKTFSTTRNLTRHKRIH
Ocbimv22019416m.p	C2H2 ZF	293	317	YHCDICDEAFSTRGRLSSHIQTPYH
Ocbimv22019416m.p	C2H2 ZF	316	338	YHCDICGQPFSRSGHLINHKRIH
Ocbimv22019416m.p	C2H2 ZF	344	365	YNCDICGKTFSRVSELSSHKRQ
Ocbimv22019416m.p	C2H2 ZF	367	389	YHCDICDTTFSQSGSLSQHKRIH
Ocbimv22019416m.p	C2H2 ZF	395	417	YQCDICKKKFSTSSSLSTHKRTH
Ocbimv22019416m.p	C2H2 ZF	423	445	YRCDICGKTFTQSGCLSQHKCIH
Ocbimv22019416m.p	C2H2 ZF	451	473	YHCDICGKAFSTTRNLTRHKCIH
Ocbimv22019416m.p	C2H2 ZF	479	501	YHCDICDETFSTRGRLSSHIRIH

Links
Other C2H2 ZF family TFs
Other *Octopus bimaculoides* TFs

0 Related TFs

">No related TF found