CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30000360m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30000360m.g
T142174_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23928941_peptide
C2H2 ZF
12
34
HQCKECNKCFTGKSNLKKHMRVH
23928941_peptide
C2H2 ZF
40
62
YQCKVCDKCFTNKSNQKKHMRVH
23928941_peptide
C2H2 ZF
68
90
YQCKECNTCFTQKSNLKTHMRVH
23928941_peptide
C2H2 ZF
96
118
YQCKECDKCFINTSNQKKHMRVH
23928941_peptide
C2H2 ZF
124
146
YQCKECNKCFTRKGHVKRHLRLH
23928941_peptide
C2H2 ZF
152
174
YQCKVCGKCFINTSNQKKHMRMH
23928941_peptide
C2H2 ZF
180
202
YQCKECNKCFTQKGTLKTHMRVH
23928941_peptide
C2H2 ZF
208
230
YKCKECNKCFTRKGDLKTHMRVH
23928941_peptide
C2H2 ZF
236
258
YKCKECNKCFTRKGDLKTHMRVH
23928941_peptide
C2H2 ZF
259
278
TECNKCFNRRSHLKTHMRVH
23928941_peptide
C2H2 ZF
284
306
YQCKECNKFYKNKCSLKTHTKVH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found