Sakowv30008117m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30008117m.g T142226_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV

BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.797 0.877
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT

ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.797 0.877
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC

GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.797 0.877
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC

GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.797 0.877
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23959626_peptide C2H2 ZF 72 93
23959626_peptide C2H2 ZF 99 121
23959626_peptide C2H2 ZF 127 149
23959626_peptide C2H2 ZF 155 177
23959626_peptide C2H2 ZF 183 205

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

Invalid Input OrderBy

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action