CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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Sakowv30011060m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30011060m.g
T142240_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23954784_peptide
C2H2 ZF
309
331
FSCEVCGKVFLNPEKLKTHTYTH
23954784_peptide
C2H2 ZF
337
361
FQCSYVECKKAFVSNYKLMRHMATH
23954784_peptide
C2H2 ZF
367
389
HTCSYCDKKFHRKDHLKNHLHTH
23954784_peptide
C2H2 ZF
396
418
FNCKECGKVYNTKPGFRKHIALH
23954784_peptide
C2H2 ZF
425
447
LTCKICNKDFESTDILLNHIKVH
23954784_peptide
C2H2 ZF
459
481
HKCEHCDRRFYTRKDVRRHLVVH
23954784_peptide
C2H2 ZF
487
510
FLCQICGQRFGRKDHLVRHSRKSH
23954785_peptide
C2H2 ZF
309
331
FSCEVCGKVFLNPEKLKTHTYTH
23954785_peptide
C2H2 ZF
337
361
FQCSYVECKKAFVSNYKLMRHMATH
23954785_peptide
C2H2 ZF
367
389
HTCSYCDKKFHRKDHLKNHLHTH
23954785_peptide
C2H2 ZF
396
418
FNCKECGKVYNTKPGFRKHIALH
23954785_peptide
C2H2 ZF
425
447
LTCKICNKDFESTDILLNHIKVH
23954785_peptide
C2H2 ZF
459
481
HKCEHCDRRFYTRKDVRRHLVVH
23954785_peptide
C2H2 ZF
487
510
FLCQICGQRFGRKDHLVRHSRKSH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action