Sakowv30016612m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30016612m.g T142291_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OSR2
M04521_2.00
Homo sapiens
NGCTACYGBD

HVCRGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX
0.813 0.974
OSR2
M08324_2.00
Homo sapiens
NBDGCTNCTGN

NCAGNAGCHVN
ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME
0.813 0.974
OSR2
M08908_2.00
Homo sapiens
NBHNYWGCTNCTSHDB

VHDSAGNAGCWRNDVN
Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C
0.813 0.974
OSR2
M04522_2.00
Homo sapiens
NGCTACTGND

HNCAGTAGCN
SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX
0.813 0.974
sob
M03674_2.00
Drosophila melanogaster
RCTACYGNRTTACGCV

BGCGTAAYNCRGTAGY
SELEX
Nitta et al.(2015)
sob_1
0.802 0.896
sob
M03675_2.00
Drosophila melanogaster
NGCGTAABNSNRGTAGY

RCTACYNSNVTTACGCN
SELEX
Nitta et al.(2015)
sob_2
0.802 0.896
sob
M06088_2.00
Drosophila melanogaster
GCTWCTGBDNBDV

BHVNHVCAGWAGC
B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892
0.802 0.896
sob
M06089_2.00
Drosophila melanogaster
BDGCTACYGKDBNN

NNVHMCRGTAGCHV
B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892
0.802 0.896
bowl
M03676_2.00
Drosophila melanogaster
GCGTAABACNRGKAGYN

NRCTMCYNGTVTTACGC
SELEX
Nitta et al.(2015)
bowl_1
0.793 0.878
bowl
M03677_2.00
Drosophila melanogaster
NGCTACYGTRTTACGCN

NGCGTAAYACRGTAGCN
SELEX
Nitta et al.(2015)
bowl_2
0.793 0.878
bowl
M06090_2.00
Drosophila melanogaster
RCTWCYGK

MCRGWAGY
B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893
0.793 0.878
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23933885_peptide C2H2 ZF 203 225
23933885_peptide C2H2 ZF 231 253
23933885_peptide C2H2 ZF 259 281
23933885_peptide C2H2 ZF 287 309
23933885_peptide C2H2 ZF 315 337

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.822
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.822
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.822
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.813
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.813
OSR2 Microcebus murinus ENSMICG00000004390 I 0.813
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.813
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.813
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.813
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.813
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.813
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.813
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.813
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.813
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.813
OSR2 Equus caballus ENSECAG00000017784 I 0.813
OSR2 Procavia capensis ENSPCAG00000003419 I 0.813
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.813
OSR2 Homo sapiens ENSG00000164920 D 0.813
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.813
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.813
XP_002934454 Xenopus tropicalis XP_002934454 I 0.813
OSR2 Canis familiaris ENSCAFG00000000493 I 0.813
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.813
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.813
SMAR005255 Strigamia maritima SMAR005255 I 0.812
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.811
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.811
osr2 Oryzias latipes ENSORLG00000002797 I 0.811
ISCW005884 Ixodes scapularis ISCW005884 I 0.805
ISCW017921 Ixodes scapularis ISCW017921 I 0.805
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.804
GH13192 Drosophila grimshawi FBgn0120669 I 0.802
GI17769 Drosophila mojavensis FBgn0140510 I 0.802
GM18136 Drosophila sechellia FBgn0173043 I 0.802
GJ17594 Drosophila virilis FBgn0204764 I 0.802
MDOA011451 Musca domestica MDOA011451 I 0.802
MCINX006060 Melitaea cinxia MCINX006060 I 0.802
GG24427 Drosophila erecta FBgn0116559 I 0.802
GK15478 Drosophila willistoni FBgn0217483 I 0.802
GE14841 Drosophila yakuba FBgn0232433 I 0.802
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.802
TC005788 Tribolium castaneum TC005788 I 0.802
KGM_20290 Danaus plexippus KGM_20290 I 0.802
LCUP002077 Lucilia cuprina LCUP002077 I 0.802
GL19470 Drosophila persimilis FBgn0157069 I 0.802
sob Drosophila melanogaster FBgn0004892 D 0.802
GF14663 Drosophila ananassae FBgn0091690 I 0.802
GD22744 Drosophila simulans FBgn0194140 I 0.800
SMAR002904 Strigamia maritima SMAR002904 I 0.800
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.800
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.797
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.797
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.797
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.797
PHUM125080 Pediculus humanus PHUM125080 I 0.795
AMIN006295 Anopheles minimus AMIN006295 I 0.793
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.793
ACEP20581 Atta cephalotes ACEP20581 I 0.793
GI23940 Drosophila mojavensis FBgn0146665 I 0.793
GL18676 Drosophila persimilis FBgn0156277 I 0.793
TC005784 Tribolium castaneum TC005784 I 0.793
AMEC005957 Anopheles melas AMEC005957 I 0.793
SINV18115 Solenopsis invicta SINV18115 I 0.793
GM18435 Drosophila sechellia FBgn0173342 I 0.793
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.793
GH13710 Drosophila grimshawi FBgn0121186 I 0.793
ACOM030727 Anopheles coluzzii ACOM030727 I 0.793
AEPI004813 Anopheles epiroticus AEPI004813 I 0.793
AFAF004720 Anopheles farauti AFAF004720 I 0.793
AFUN006320 Anopheles funestus AFUN006320 I 0.793
AATE001257 Anopheles atroparvus AATE001257 I 0.793
AAEL008961 Aedes aegypti AAEL008961 I 0.793
GG24967 Drosophila erecta FBgn0117096 I 0.793
LCUP002070 Lucilia cuprina LCUP002070 I 0.793
AMEM017192 Anopheles merus AMEM017192 I 0.793
PHUM445550 Pediculus humanus PHUM445550 I 0.793
SINV17987 Solenopsis invicta SINV17987 I 0.793
GB49901 Apis mellifera GB49901 I 0.793
GB49914 Apis mellifera GB49914 I 0.793
ODR2 Anopheles gambiae AGAP008222 I 0.793
GF15254 Drosophila ananassae FBgn0092279 I 0.793
GE18258 Drosophila yakuba FBgn0235686 I 0.793
GK14650 Drosophila willistoni FBgn0216656 I 0.793
GD23254 Drosophila simulans FBgn0194642 I 0.793
bowl Drosophila melanogaster FBgn0004893 D 0.793
GJ21213 Drosophila virilis FBgn0208346 I 0.793
L798_02529 Zootermopsis nevadensis L798_02529 I 0.793
ODR1 Anopheles gambiae AGAP007973 I 0.793
NV12189 Nasonia vitripennis NV12189 I 0.793
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.793
L798_02536 Zootermopsis nevadensis L798_02536 I 0.793
NV12185 Nasonia vitripennis NV12185 I 0.793
MDOA005526 Musca domestica MDOA005526 I 0.793
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.791
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.791
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.791
AAEL007453 Aedes aegypti AAEL007453 I 0.791
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.790
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.789
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.787
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.786
ADAC005347 Anopheles darlingi ADAC005347 I 0.785
ADAC010373 Anopheles darlingi ADAC010373 I 0.785
ACEP20577 Atta cephalotes ACEP20577 I 0.785
PHUM125070 Pediculus humanus PHUM125070 I 0.783
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.783
ENSCING00000021903 Ciona intestinalis ENSCING00000021903 I 0.777