CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30016711m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30016711m.g
T142294_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23929804_peptide
C2H2 ZF
99
121
YQCEHCDESFMYYIDLRQHLKIH
23929804_peptide
C2H2 ZF
127
149
YHCEHCGKSFITMSKLECHIRTH
23929804_peptide
C2H2 ZF
155
177
YRCVLCNKAFAESSKLKRHMRKH
23929804_peptide
C2H2 ZF
183
205
YECKQCGRKFAYSGNFTQHIKQH
23929804_peptide
C2H2 ZF
212
234
YQCEHCAENFVLYNDLRQHLKIH
23929804_peptide
C2H2 ZF
240
262
FHCKQCEKSFISYSKLECHIRTH
23929804_peptide
C2H2 ZF
268
290
YQCVLCDKAFAESSKLKRHMRKH
23929804_peptide
C2H2 ZF
296
318
HECQDCGKRFAYSGNFKHHIRKH
23929804_peptide
C2H2 ZF
327
349
YQCDYCEESFEEFKFLSRHMHVH
23929804_peptide
C2H2 ZF
377
401
FQCGRCDKVFAEAHTLKQHVNVTDH
23929804_peptide
C2H2 ZF
407
429
YKCQQCRRRFAYSSYLKLHVKTH
23929804_peptide
C2H2 ZF
433
455
YQCEQCGKGFSNENILTQHSRTH
23929804_peptide
C2H2 ZF
461
483
YQCYFCEKSFSYLQCLKRHTKVH
23929804_peptide
C2H2 ZF
491
513
YQCRHCEKSFPQLDWLHEHLETH
23929804_peptide
C2H2 ZF
519
541
YTCNCCNEYFQNASELREHRRTH
23929804_peptide
C2H2 ZF
565
587
YECKLCHKKFDSLNKMKYHIRLH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found