CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30016891m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30016891m.g
T142296_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23940939_peptide
C2H2 ZF
4
26
HRCDKCEKSYSHITSLRRHIRSH
23940939_peptide
C2H2 ZF
32
54
YHCEQCKKSFTQLSSLKYHIRSH
23940939_peptide
C2H2 ZF
60
82
YQCGLCEKNFTHSSGLKRHIRTH
23940939_peptide
C2H2 ZF
88
110
YHCEQCEKSFTRPTYLEHHKRTH
23940939_peptide
C2H2 ZF
116
138
YHCEQCERSFSLLTTFKYHLQTH
23940939_peptide
C2H2 ZF
144
166
YHCQQCEKSFSHLFILKRHIQTH
23940939_peptide
C2H2 ZF
172
194
YHCEHCEKSFAQSSNLKQHMRTH
23940939_peptide
C2H2 ZF
200
222
YHCMLCWKSFASSSHLKYHIRTH
23940939_peptide
C2H2 ZF
228
250
YHCEQCGKSFSHLYSHKRHIQTH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found