CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30028805m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30028805m.g
T142382_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23930065_peptide
C2H2 ZF
557
580
CVCAVCNKSYATTSGLRRHKLKQH
23930065_peptide
C2H2 ZF
601
623
ACMLCERKFSHKKNLKSHMDTVH
23930065_peptide
C2H2 ZF
630
653
YECEHCDRKYTEKKYLRKHNYRTH
23930065_peptide
C2H2 ZF
700
721
FTCEHCWKSVGDKTDLQAHLKR
23930065_peptide
C2H2 ZF
731
754
FPCSHCEKVYSFEYTRNAHVKKIH
23930065_peptide
C2H2 ZF
758
780
DCTECGQFFDNTELRNQHQALEH
23930065_peptide
C2H2 ZF
785
807
YQCEYCSKAFGMKISLAWHIKKH
23930065_peptide
C2H2 ZF
813
835
YPCDICGKIFLHKDRLQSHSLSH
23930065_peptide
C2H2 ZF
842
864
LCHVCGVAFKTNNALNSHQRRKH
23930065_peptide
C2H2 ZF
873
896
YRCPKCGKSFISFSNMKRHLCAIH
23930065_peptide
C2H2 ZF
901
924
FLCDICGKRYTSLLSMKLHRRTIH
23930065_peptide
C2H2 ZF
933
955
KCHLCDKTFKTNRAVTLHVRSVH
23930065_peptide
C2H2 ZF
961
983
YGCFRCEKRFFTNTKLKRHLETH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found