TF Information

Sakowv30033343m.g *(Saccoglossus kowalevskii)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Sakowv30033343m.g	T142424_2.00	JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ovo M03669_2.00	Drosophila melanogaster	DNMCCGTTA	TAACGGKNH	SELEX Nitta et al.(2015) ovo_1	0.770	0.797
ovo M06064_2.00	Drosophila melanogaster	CHGTTAHW	WDTAACDG	B1H Zhu et al.(2011) ovo_FlyReg_FBgn0003028	0.770	0.797
ovo M06065_2.00	Drosophila melanogaster	RGTHCCGTTAT	ATAACGGDACY	B1H Zhu et al.(2011) ovo_SANGER_5_FBgn0003028	0.770	0.797
ovo M06066_2.00	Drosophila melanogaster	DDTMCCGTTABNYN	NRNVTAACGGKAHH	B1H Zhu et al.(2011) ovo_SOLEXA_5_FBgn0003028	0.770	0.797
ovo M02671_2.00	Drosophila melanogaster	DCNGTTWSD	HSWAACNGH	SELEX Mathelier et al.(2014) MA0126.1	0.770	0.797
ovo M09662_2.00	Drosophila melanogaster	DCNGTTAMWNNDV	BHNNWKTAACNGH	Misc Kulakovskiy et al.(2009) ovo	0.770	0.797
ovo M10373_2.00	Drosophila melanogaster	NNNDCNGTTWSDDNN	NNHHSWAACNGHNNN	Transfac Matys et al.(2006) I$OVO_01	0.770	0.797
ovo M10374_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$OVO_Q6	0.770	0.797
lin-48 M00614_2.00	Caenorhabditis elegans	HCCGTTAB	VTAACGGD	PBM Narasimhan et al.(2015) pTH9155	0.770	0.783
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
23915419_peptide	C2H2 ZF	366	388	FMCEVCNKVFPLQRLLNRHMKCH
23915419_peptide	C2H2 ZF	394	416	YHCAYCGKGFNDTFDLKRHVRTH
23915419_peptide	C2H2 ZF	422	445	YKCEHCGKSFTQRCSLESHLSKVH
23915420_peptide	C2H2 ZF	351	373	FMCEVCNKVFPLQRLLNRHMKCH
23915420_peptide	C2H2 ZF	379	401	YHCAYCGKGFNDTFDLKRHVRTH
23915420_peptide	C2H2 ZF	407	430	YKCEHCGKSFTQRCSLESHLSKVH
23915421_peptide	C2H2 ZF	351	373	FMCEVCNKVFPLQRLLNRHMKCH
23915421_peptide	C2H2 ZF	379	401	YHCAYCGKGFNDTFDLKRHVRTH
23915421_peptide	C2H2 ZF	407	430	YKCEHCGKSFTQRCSLESHLSKVH
23915422_peptide	C2H2 ZF	283	305	FMCEVCNKVFPLQRLLNRHMKCH
23915422_peptide	C2H2 ZF	311	333	YHCAYCGKGFNDTFDLKRHVRTH
23915422_peptide	C2H2 ZF	339	362	YKCEHCGKSFTQRCSLESHLSKVH

Links
Other C2H2 ZF family TFs
Other *Saccoglossus kowalevskii* TFs

Invalid Input OrderBy

61 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action