CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30042943m.g
(
Saccoglossus kowalevskii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Sakowv30042943m.g
T142487_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23934972_peptide
C2H2 ZF
40
62
HKCKFCGYESDNLGHVIRHMPVH
23934972_peptide
C2H2 ZF
71
93
YKCTHCSASFNIKGILVSHMKVH
23934972_peptide
C2H2 ZF
102
125
YACDHCDKVYSTKAGRHKHMTVHH
23934972_peptide
C2H2 ZF
178
201
FNCAQCNYVAQTMVLLKIHVREFH
23934972_peptide
C2H2 ZF
242
264
MQCVLCSFTTVEHSALTAHLKEH
23934972_peptide
C2H2 ZF
326
348
YSCPYCEYSVSTTRNLEIHMRLH
23934972_peptide
C2H2 ZF
354
376
FRCELCDFVSGNAKTFEWHMRCH
23934972_peptide
C2H2 ZF
459
482
FKCNMCVYSASKLTNFRQHIRRYH
23934972_peptide
C2H2 ZF
489
511
YKCEQCDFVAIQRSDLVVHGRKH
23934972_peptide
C2H2 ZF
517
539
YKCDQCDYETARKSLLTQHFRQH
23934972_peptide
C2H2 ZF
545
567
YVCNMCPFATATYNNLMRHRRCH
23934972_peptide
C2H2 ZF
573
595
YQCKECDFSTSQKSHLMRHMRVH
23934972_peptide
C2H2 ZF
601
623
FACDKCAFQTAHPSELKRHESQH
Links
Other
C2H2 ZF
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found