Sakowv30044960m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30044960m.g T142510_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ZNF76
M04398_2.00
Homo sapiens
NNHWCCCABAATGCAHYRCRN

NYGYRDTGCATTVTGGGWDNN
SELEX
Yin et al.(2017)
ZNF76_eDBD_HT-SELEX
0.783 0.857
ZNF76
M08278_2.00
Homo sapiens
BCSCRNDGSMTBCTGGGARNT

ANYTCCCAGVAKSCHNYGSGV
ChIP-seq
Schmitges et al.(2016)
P36508_1-7.RCADE
0.783 0.857
ZNF76
M08856_2.00
Homo sapiens
ACTMCMHYTCCCAGVRKSCHHY

RDDGSMYBCTGGGARDKGKAGT
Misc
Kulakovskiy et al.(2013)
ZNF76_HUMAN.H11MO.0.C
0.783 0.857
ZNF76
M04399_2.00
Homo sapiens
NYTWCCCAYAATGCAHYRCDN

NHGYRDTGCATTRTGGGWARN
SELEX
Yin et al.(2017)
ZNF76_eDBD_Methyl-HT-SELEX
0.783 0.857
Zfp143
M09010_2.00
Mus musculus
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_MOUSE.H11MO.0.A
0.779 0.870
ZNF143
M02899_2.00
Homo sapiens
YWCCCAYAATGCAYYG

CRRTGCATTRTGGGWR
SELEX
Jolma et al.(2013)
ZNF143_1
0.779 0.863
ZNF143
M07931_2.00
Homo sapiens
RACTACAWYTCCCAG

CTGGGARWTGTAGTY
ChIP-seq
Gerstein et al.(2012)
GM12878_ZNF143_Stanford
0.779 0.863
ZNF143
M08910_2.00
Homo sapiens
RRACTACAWYTCCCAGVRKSCH

DGSMYBCTGGGARWTGTAGTYY
Misc
Kulakovskiy et al.(2013)
ZN143_HUMAN.H11MO.0.A
0.779 0.863
ZNF143
M09510_2.00
Homo sapiens
NNYTCCCAKVAKSCH

DGSMTBMTGGGARNN
Misc
Heinz et al.(2010)
CUTLL-ZNF143_GSE29600
0.779 0.863
ZNF143
M10247_2.00
Homo sapiens
NYYWCCCABMATGCAHYRCRNB

VNYGYRDTGCATKVTGGGWRRN
Transfac
Matys et al.(2006)
V$STAF_01
0.779 0.863
ZNF143
M10248_2.00
Homo sapiens
MHBWCCCAKVRTBCMWHGMRV

BYKCDWKGVAYBMTGGGWVDK
Transfac
Matys et al.(2006)
V$STAF_02
0.779 0.863
ZNF143
M10249_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STAF_Q4_01
0.779 0.863
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23920362_peptide C2H2 ZF 251 275
23920362_peptide C2H2 ZF 281 305
23920362_peptide C2H2 ZF 311 335
23920362_peptide C2H2 ZF 341 365
23920362_peptide C2H2 ZF 371 395
23920362_peptide C2H2 ZF 401 425
23920362_peptide C2H2 ZF 431 454
23920363_peptide C2H2 ZF 251 275
23920363_peptide C2H2 ZF 281 305
23920363_peptide C2H2 ZF 311 335
23920363_peptide C2H2 ZF 341 365
23920363_peptide C2H2 ZF 371 395
23920363_peptide C2H2 ZF 401 425
23920363_peptide C2H2 ZF 431 454
23920364_peptide C2H2 ZF 251 275
23920364_peptide C2H2 ZF 281 305
23920364_peptide C2H2 ZF 311 335
23920364_peptide C2H2 ZF 341 365
23920364_peptide C2H2 ZF 371 395
23920364_peptide C2H2 ZF 401 425
23920364_peptide C2H2 ZF 431 454

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PMAA_024740 Penicillium marneffei PMAA_024740 I 0.000
PFICI_03782 Pestalotiopsis fici PFICI_03782 I 0.000
PEX1_076370 Penicillium expansum PEX1_076370 I 0.000
PDIP_73930 Penicillium digitatum PDIP_73930 I 0.000
PDE_02765 Penicillium oxalicum PDE_02765 I 0.000
PCH_Pc18g02200 Penicillium rubens PCH_Pc18g02200 I 0.000
PABG_02907 Paracoccidioides brasiliensis PABG_02907 I 0.000
PAAG_08645 Paracoccidioides sp lutzii PAAG_08645 I 0.000
UCRNP2_6191 Neofusicoccum parvum UCRNP2_6191 I 0.000
MYCTH_2304200 Myceliophthora thermophila MYCTH_2304200 I 0.000
MPH_05713 Macrophomina phaseolina MPH_05713 I 0.000
MCYG_00903 Arthroderma otae MCYG_00903 I 0.000
PMAA_024740 Talaromyces marneffei PMAA_024740 I 0.000
PODANS_7_2090 Podospora anserina PODANS_7_2090 I 0.000
Pc18g02200 Penicillium chrysogenum Pc18g02200 I 0.000
e_gw1.00129.236.1 Aspergillus carbonarius e_gw1.00129.236.1 I 0.000
AB04375.1 Alternaria brassicicola AB04375.1 I 0.000
U727_00431293291 Penicillium solitum U727_00431293291 I 0.000
TSTA_033430 Talaromyces stipitatus TSTA_033430 I 0.000
THITE_2119520 Thielavia terrestris THITE_2119520 I 0.000
SNOG_11811 Phaeosphaeria nodorum SNOG_11811 I 0.000
SETTUDRAFT_102560 Setosphaeria turcica SETTUDRAFT_102560 I 0.000
PVAR5_6448 Byssochlamys spectabilis PVAR5_6448 I 0.000
PTT_13020 Pyrenophora teres PTT_13020 I 0.000
PTRG_00243 Pyrenophora triticirepentis PTRG_00243 I 0.000
MAPG_07954 Magnaporthe poae MAPG_07954 I 0.000
PITC_027910 Penicillium italicum PITC_027910 I 0.000
CTHT_0024110 Chaetomium thermophilum CTHT_0024110 I 0.000
CPC735_004330 Coccidioides posadasii CPC735_004330 I 0.000
COCVIDRAFT_34345 Bipolaris victoriae COCVIDRAFT_34345 I 0.000
COCSADRAFT_102727 Bipolaris sorokiniana COCSADRAFT_102727 I 0.000
COCMIDRAFT_84665 Bipolaris oryzae COCMIDRAFT_84665 I 0.000
COCCADRAFT_37717 Bipolaris zeicola COCCADRAFT_37717 I 0.000
COCC4DRAFT_126547 Bipolaris maydis COCC4DRAFT_126547 I 0.000
CHGG_02890 Chaetomium globosum CHGG_02890 I 0.000
ANIA_04077 Aspergillus nidulans CADANIAG00004604 I 0.000
MCYG_00903 Microsporum canis MCYG_00903 I 0.000
EPUS_04985 Endocarpon pusillum EPUS_04985 I 0.000
CIMG_03917 Coccidioides immitis CIMG_03917 I 0.000
M437DRAFT_83473 Aureobasidium melanogenum M437DRAFT_83473 I 0.000
LEMA_P018010.1 Leptosphaeria maculans LEMA_P018010.1 I 0.000
HCBG_06971 Histoplasma capsulatum HCBG_06971 I 0.000
GGTG_08149 Gaeumannomyces graminis GGTG_08149 I 0.000
X797_001665 Metarhizium robertsii X797_001665 N 0.000
MGU_01854 Metarhizium guizhouense MGU_01854 N 0.000
CCM_01786 Cordyceps militaris CCM_01786 N 0.000
MBR_01178 Metarhizium brunneum MBR_01178 N 0.000
OCS_02929 Ophiocordyceps sinensis OCS_02929 N 0.000
UV8b_7435 Ustilaginoidea virens UV8b_7435 N 0.000
VHEMI05316 Torrubiella hemipterigena VHEMI05316 N 0.000
ACRE_001610 Acremonium chrysogenum ACRE_001610 N 0.000
MAM_02403 Metarhizium album MAM_02403 N 0.000
gw1.3.1452.1 Nectria haematococca gw1.3.1452.1 N 0.000
TRIVIDRAFT_12894 Trichoderma virens TRIVIDRAFT_12894 N 0.000
TRIREDRAFT_57756 Trichoderma reesei TRIREDRAFT_57756 N 0.000
FGRRES_07243 Fusarium graminearum FGRRES_07243 N 0.000
FFUJ_03219 Fusarium fujikuroi FFUJ_03219 N 0.000
MANI_008576 Metarhizium anisopliae MANI_008576 N 0.000
FPSE_00192 Fusarium pseudograminearum FPSE_00192 N 0.000
FVEG_05341 Fusarium verticillioides FVEG_05341 N 0.000
S40285_01213 Stachybotrys chlorohalonata S40285_01213 N 0.000
S40288_05241 Stachybotrys chartarum S40288_05241 N 0.000
NechaG23657 Fusarium solani NechaG23657 N 0.000
MAC_08651 Metarhizium acridum MAC_08651 N 0.000
TRIATDRAFT_164783 Trichoderma atroviride TRIATDRAFT_164783 N 0.000
FOXG_02174 Fusarium oxysporum FOXG_02174 N 0.000