Aquca_017_00778 (Aquilegia coerulea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aquca_017_00778 T142545_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.774 0.905
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.774 0.905
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_017_00778.1 C2H2 ZF 358 380
Aquca_017_00778.1 C2H2 ZF 381 406
Aquca_017_00778.2 C2H2 ZF 358 380
Aquca_017_00778.2 C2H2 ZF 381 406

Links

Other C2H2 ZF family TFs
Other Aquilegia coerulea TFs

Invalid Input OrderBy

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action