Bostr.25219s0116 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.25219s0116 T142598_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.25219s0116.1.p C2H2 ZF 269 290
Bostr.25219s0116.1.p C2H2 ZF 290 315

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29908.m006047 Ricinus communis 29908.m006047 N 0.779
30055.m001542 Ricinus communis 30055.m001542 N 0.779
30061.m000294 Ricinus communis 30061.m000294 N 0.759
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N 0.809
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N 0.809
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N 0.809
WIP3 Arabidopsis thaliana AT1G08290 N 0.821
BGIOSGA031001 Oryza indica BGIOSGA031001 N 0.769
Bo5g008880 Brassica oleracea Bo5g008880 N 0.811
Bo8g112550 Brassica oleracea Bo8g112550 N 0.811
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N 0.790
Bra018638 Brassica rapa Bra018638 N 0.811
Bra031621 Brassica rapa Bra031621 N 0.811
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N 0.769
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N 0.763
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N 0.790
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N 0.821
Carubv10009617m.g Capsella rubella Carubv10009617m.g N 0.821
Carubv10012266m.g Capsella rubella Carubv10012266m.g N 0.796
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N 0.779
cassava16214.m1 Manihot esculenta cassava16214.m1 N 0.779
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.765
cassava44390.m1 Manihot esculenta cassava44390.m1 N 0.779
Ca_07051 Cicer arietinum Ca_07051 N 0.779
Ca_16482 Cicer arietinum Ca_16482 N 0.779
Ca_27078 Cicer arietinum Ca_27078 N 0.779
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N 0.773
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N 0.773
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N 0.779
Cla000184 Citrullus lanatus Cla000184 N 0.792
Cla002714 Citrullus lanatus Cla002714 N 0.769
Cla015481 Citrullus lanatus Cla015481 N 0.759
Cucsa.050260 Cucumis sativus Cucsa.050260 N 0.759
Cucsa.065460 Cucumis sativus Cucsa.065460 N 0.759
Cucsa.199850 Cucumis sativus Cucsa.199850 N 0.792
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.769
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N 0.779
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N 0.782
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N 0.775
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N 0.779
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.769
F775_14972 Aegilops tauschii F775_14972 N 0.763
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N 0.821
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N 0.790
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N 0.779
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.759
GLYMA11G19060 Glycine max GLYMA11G19060 N 0.779
GLYMA12G09400 Glycine max GLYMA12G09400 N 0.779
GLYMA12G30930 Glycine max GLYMA12G30930 N 0.779
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.759
GLYMA13G01720 Glycine max GLYMA13G01720 N 0.779
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.759
GLYMA13G39370 Glycine max GLYMA13G39370 N 0.779
GLYMA14G35140 Glycine max GLYMA14G35140 N 0.779
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.759
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N 0.779
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N 0.765
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N 0.765
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N 0.779
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N 0.765
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N 0.773
GRMZM2G071101 Zea mays GRMZM2G071101 N 0.769
GRMZM2G084014 Zea mays GRMZM2G084014 N 0.763
GRMZM2G445684 Zea mays GRMZM2G445684 N 0.769
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.765
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.775
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N 0.759
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.759
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N 0.773
LPERR08G16620 Leersia perrieri LPERR08G16620 N 0.769
LPERR09G10700 Leersia perrieri LPERR09G10700 N 0.769
Lus10004887.g Linum usitatissimum Lus10004887.g N 0.803
Lus10020597.g Linum usitatissimum Lus10020597.g N 0.803
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.775
Lus10033454.g Linum usitatissimum Lus10033454.g N 0.773
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.775
MDP0000131949 Malus domestica MDP0000131949 N 0.779
MDP0000142494 Malus domestica MDP0000142494 N 0.757
MDP0000144266 Malus domestica MDP0000144266 N 0.759
MDP0000300013 Malus domestica MDP0000300013 N 0.779
MDP0000573922 Malus domestica MDP0000573922 N 0.770
mgf022319m Mimulus guttatus mgf022319m N 0.759
mgf022981m Mimulus guttatus mgf022981m N 0.806
MLOC_2787 Hordeum vulgare MLOC_2787 N 0.763
OB08G26650 Oryza brachyantha OB08G26650 N 0.769
OBART08G19670 Oryza barthii OBART08G19670 N 0.769
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N 0.769
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N 0.769
OMERI08G16450 Oryza meridionalis OMERI08G16450 N 0.769
OMERI09G11270 Oryza meridionalis OMERI09G11270 N 0.769
ONIVA08G21960 Oryza nivara ONIVA08G21960 N 0.769
ONIVA09G15100 Oryza nivara ONIVA09G15100 N 0.769
OPUNC08G17810 Oryza punctata OPUNC08G17810 N 0.769
OPUNC09G12930 Oryza punctata OPUNC09G12930 N 0.769
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N 0.773
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N 0.779
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N 0.769
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N 0.769
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N 0.769
OS08G0504000 Oryza sativa OS08G0504000 N 0.769
OS09G0485600 Oryza sativa OS09G0485600 N 0.769
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N 0.763
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N 0.769
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N 0.769
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.775
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N 0.809
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N 0.782
PK05257.1 Cannabis sativa PK05257.1 N 0.773
Pm001374 Prunus mume Pm001374 N 0.779
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.765
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N 0.782
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N 0.779
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.765
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N 0.779
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N 0.779
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N 0.779
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N 0.779
Sb02g028220 Sorghum bicolor Sb02g028220 N 0.763
Sb07g028010 Sorghum bicolor Sb07g028010 N 0.769
Si013819m.g Setaria italica Si013819m.g N 0.769
Si029897m.g Setaria italica Si029897m.g N 0.763
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.775
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N 0.782
TCM_005892 Theobroma cacao TCM_005892 N 0.765
TCM_034881 Theobroma cacao TCM_034881 N 0.773
TCM_041441 Theobroma cacao TCM_041441 N 0.779
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N 0.821
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N 0.763
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N 0.763
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N 0.763
TRIUR3_30490 Triticum urartu TRIUR3_30490 N 0.763
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.769
WIP3 Vitis vinifera VIT_06s0080g00270 N 0.779
TT1 Vitis vinifera VIT_18s0001g05860 N 0.773