CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26833s0090
(
Boechera stricta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Bostr.26833s0090
T142606_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26833s0090.1.p
C2H2 ZF
214
236
YMCDICGKVLRSYQALGGHRTSH
Bostr.26833s0090.1.p
C2H2 ZF
255
277
YECQICNRVFESGQALGGHKKVH
Links
Other
C2H2 ZF
family TFs
Other
Boechera stricta
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0542s0042
Capsella grandiflora
Cagra.0542s0042
N
0.797
Carubv10028614m.g
Capsella rubella
Carubv10028614m.g
N
0.797
AT5G61470
Arabidopsis thaliana
AT5G61470
N
0.788
Bra012953
Brassica rapa
Bra012953
N
0.774
Bo7g098740
Brassica oleracea
Bo7g098740
N
0.774
Thhalv10005323m.g
Eutrema salsugineum
Thhalv10005323m.g
N
0.768
Bo2g161550
Brassica oleracea
Bo2g161550
N
0.763
Eucgr.K00165
Eucalyptus grandis
Eucgr.K00165
I
0.757