Ciclev10005189m.g (Citrus clementina)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ciclev10005189m.g T142764_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10005189m C2H2 ZF 298 319
Ciclev10005189m C2H2 ZF 318 344

Links

Other C2H2 ZF family TFs
Other Citrus clementina TFs

259 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00011p00256770 Amborella trichopoda AMTR_s00011p00256770 N 0.000
Aquca_030_00311 Aquilegia coerulea Aquca_030_00311 N 0.000
BRADI4G38000 Brachypodium distachyon BRADI4G38000 N 0.000
evm.TU.supercontig_30.114 Carica papaya evm.TU.supercontig_30.114 N 0.000
Cla010033 Citrullus lanatus Cla010033 N 0.000
Ciclev10015448m.g Citrus clementina Ciclev10015448m.g N 0.000
orange1.1g015397m.g Citrus sinensis orange1.1g015397m.g N 0.000
Cucsa.048660 Cucumis sativus Cucsa.048660 N 0.000
gene19969-v1.0-hybrid Fragaria vesca gene19969-v1.0-hybrid N 0.000
GLYMA08G05390 Glycine max GLYMA08G05390 N 0.000
GLYMA05G34280 Glycine max GLYMA05G34280 N 0.000
Gorai.008G050900 Gossypium raimondii Gorai.008G050900 N 0.000
MLOC_57580 Hordeum vulgare MLOC_57580 N 0.000
LPERR09G15520 Leersia perrieri LPERR09G15520 N 0.000
Lus10036234.g Linum usitatissimum Lus10036234.g N 0.000
Lus10038373.g Linum usitatissimum Lus10038373.g N 0.000
chr4.CM0042.1850.nd Lotus japonicus chr4.CM0042.1850.nd N 0.000
cassava20557.m1 Manihot esculenta cassava20557.m1 N 0.000
mgf011479m Mimulus guttatus mgf011479m N 0.000
mgf015174m Mimulus guttatus mgf015174m N 0.000
mgf015709m Mimulus guttatus mgf015709m N 0.000
GSMUA_Achr10G20960_001 Musa acuminata GSMUA_Achr10G20960_001 N 0.000
GSMUA_Achr11G13680_001 Musa acuminata GSMUA_Achr11G13680_001 N 0.000
GSMUA_Achr11G18180_001 Musa acuminata GSMUA_Achr11G18180_001 N 0.000
OBART09G19610 Oryza barthii OBART09G19610 N 0.000
OB09G26240 Oryza brachyantha OB09G26240 N 0.000
ORGLA09G0158300 Oryza glaberrima ORGLA09G0158300 N 0.000
BGIOSGA029268 Oryza indica BGIOSGA029268 N 0.000
ONIVA09G20740 Oryza nivara ONIVA09G20740 N 0.000
ORUFI10G16430 Oryza rufipogon ORUFI10G16430 N 0.000
OS09G0560900 Oryza sativa OS09G0560900 N 0.000
POPTR_0001s16080 Populus trichocarpa POPTR_0001s16080 N 0.000
POPTR_0003s07180 Populus trichocarpa POPTR_0003s07180 N 0.000
Pm010813 Prunus mume Pm010813 N 0.000
29994.m000464 Ricinus communis 29994.m000464 N 0.000
SapurV1A.3784s0010 Salix purpurea SapurV1A.3784s0010 N 0.000
SapurV1A.0104s0210 Salix purpurea SapurV1A.0104s0210 N 0.000
SapurV1A.0273s0180 Salix purpurea SapurV1A.0273s0180 N 0.000
Solyc02g081620.2 Solanum lycopersicum Solyc02g081620.2 N 0.000
PGSC0003DMG401017733 Solanum tuberosum PGSC0003DMG401017733 N 0.000
TCM_005999 Theobroma cacao TCM_005999 N 0.000
Traes_5BL_6688D6ECE Triticum aestivum Traes_5BL_6688D6ECE N 0.000
TRIUR3_07451 Triticum urartu TRIUR3_07451 N 0.000
SUF4 Vitis vinifera VIT_01s0011g01240 N 0.000