Eucgr.A01230 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.A01230 T142815_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT3G53600
M01856_2.00
Arabidopsis thaliana
NNHASWN

NWSTDNN
PBM
Weirauch et al.(2014)
pTH7188
0.789 0.761
AT3G53600
M00858_2.00
Arabidopsis thaliana
NNNNRSWN

NWSYNNNN
PBM
Franco-Zorrilla et al.(2014)
ZAT18
0.789 0.761
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.784 0.739
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.780 0.761
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN

NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.780 0.761
ZAT1
M01167_2.00
Arabidopsis thaliana
NHRCTNN

NNAGYDN
PBM
Lambert et al.(2019)
pTH10246
0.768 0.652
AT3G46070
M06813_2.00
Arabidopsis thaliana
HYHHYHTCACTYHHH

DDDRAGTGADRDDRD
Dap-seq
OMalley et al.(2016)
AT3G46070_col_a
0.766 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A01230.1 C2H2 ZF 42 64
Eucgr.A01230.1 C2H2 ZF 91 113

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

337 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Sakowv30034954m.g Saccoglossus kowalevskii Sakowv30034954m.g N 0.000
Sakowv30034955m.g Saccoglossus kowalevskii Sakowv30034955m.g N 0.000
Sakowv30034956m.g Saccoglossus kowalevskii Sakowv30034956m.g N 0.000
Sakowv30034957m.g Saccoglossus kowalevskii Sakowv30034957m.g N 0.000
Sakowv30034959m.g Saccoglossus kowalevskii Sakowv30034959m.g N 0.000
Sakowv30034960m.g Saccoglossus kowalevskii Sakowv30034960m.g N 0.000
Sakowv30034963m.g Saccoglossus kowalevskii Sakowv30034963m.g N 0.000
Sakowv30034965m.g Saccoglossus kowalevskii Sakowv30034965m.g N 0.000
Sakowv30034966m.g Saccoglossus kowalevskii Sakowv30034966m.g N 0.000
Sakowv30036994m.g Saccoglossus kowalevskii Sakowv30036994m.g N 0.000
Sakowv30036995m.g Saccoglossus kowalevskii Sakowv30036995m.g N 0.000
Sakowv30036996m.g Saccoglossus kowalevskii Sakowv30036996m.g N 0.000
Sakowv30036997m.g Saccoglossus kowalevskii Sakowv30036997m.g N 0.000
Sakowv30036999m.g Saccoglossus kowalevskii Sakowv30036999m.g N 0.000
Sakowv30037000m.g Saccoglossus kowalevskii Sakowv30037000m.g N 0.000
Sakowv30037002m.g Saccoglossus kowalevskii Sakowv30037002m.g N 0.000
Sakowv30037003m.g Saccoglossus kowalevskii Sakowv30037003m.g N 0.000
Sakowv30037004m.g Saccoglossus kowalevskii Sakowv30037004m.g I 0.000
Sakowv30037005m.g Saccoglossus kowalevskii Sakowv30037005m.g N 0.000
Sakowv30037006m.g Saccoglossus kowalevskii Sakowv30037006m.g N 0.000
Sakowv30037007m.g Saccoglossus kowalevskii Sakowv30037007m.g I 0.000
Sakowv30037008m.g Saccoglossus kowalevskii Sakowv30037008m.g N 0.000
Sakowv30037009m.g Saccoglossus kowalevskii Sakowv30037009m.g N 0.000
Sakowv30037011m.g Saccoglossus kowalevskii Sakowv30037011m.g N 0.000
Sakowv30037015m.g Saccoglossus kowalevskii Sakowv30037015m.g I 0.000
Sakowv30037025m.g Saccoglossus kowalevskii Sakowv30037025m.g N 0.000
Sakowv30037029m.g Saccoglossus kowalevskii Sakowv30037029m.g N 0.000
Sakowv30037033m.g Saccoglossus kowalevskii Sakowv30037033m.g N 0.000
Sakowv30037034m.g Saccoglossus kowalevskii Sakowv30037034m.g N 0.000
Sakowv30037039m.g Saccoglossus kowalevskii Sakowv30037039m.g I 0.000
Sakowv30037045m.g Saccoglossus kowalevskii Sakowv30037045m.g I 0.000
Sakowv30037046m.g Saccoglossus kowalevskii Sakowv30037046m.g N 0.000
Sakowv30037050m.g Saccoglossus kowalevskii Sakowv30037050m.g I 0.000
Sakowv30037051m.g Saccoglossus kowalevskii Sakowv30037051m.g N 0.000
Sakowv30037052m.g Saccoglossus kowalevskii Sakowv30037052m.g N 0.000
Sakowv30037056m.g Saccoglossus kowalevskii Sakowv30037056m.g N 0.000