Eucgr.B02395 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.B02395 T142829_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.800 0.761
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN

NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.795 0.783
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN

NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.795 0.783
ZAT7
M01855_2.00
Arabidopsis thaliana
NVDBRCACTNNNN

NNNNAGTGYVHBN
PBM
Weirauch et al.(2014)
pTH7540
0.771 0.826
AT3G46070
M06813_2.00
Arabidopsis thaliana
HYHHYHTCACTYHHH

DDDRAGTGADRDDRD
Dap-seq
OMalley et al.(2016)
AT3G46070_col_a
0.763 0.804
AT3G53600
M01856_2.00
Arabidopsis thaliana
NNHASWN

NWSTDNN
PBM
Weirauch et al.(2014)
pTH7188
0.762 0.761
AT3G53600
M00858_2.00
Arabidopsis thaliana
NNNNRSWN

NWSYNNNN
PBM
Franco-Zorrilla et al.(2014)
ZAT18
0.762 0.761
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B02395.1 C2H2 ZF 65 87
Eucgr.B02395.1 C2H2 ZF 114 136

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29933.m001454 Ricinus communis 29933.m001454 N 0.000
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I 0.000
Aquca_005_00315 Aquilegia coerulea Aquca_005_00315 I 0.000
MYB14 Arabidopsis thaliana AT2G31180 I 0.000
BGIOSGA014912 Oryza indica BGIOSGA014912 I 0.000
Bo3g025100 Brassica oleracea Bo3g025100 I 0.000
Bo4g176020 Brassica oleracea Bo4g176020 I 0.000
Bo4g176030 Brassica oleracea Bo4g176030 I 0.000
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I 0.000
Bra018267 Brassica rapa Bra018267 I 0.000
Bra022831 Brassica rapa Bra022831 I 0.000
BRADI5G13041 Brachypodium distachyon BRADI5G13041 I 0.000
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I 0.000
Carubv10023905m.g Capsella rubella Carubv10023905m.g I 0.000
cassava25784.m1 Manihot esculenta cassava25784.m1 I 0.000
cassava33918.m1 Manihot esculenta cassava33918.m1 I 0.000
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I 0.000
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I 0.000
cassava5261.m1 Manihot esculenta cassava5261.m1 N 0.000
cassava5263.m1 Manihot esculenta cassava5263.m1 N 0.000
Ca_17657 Cicer arietinum Ca_17657 I 0.000
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I 0.000
Ciclev10008921m.g Citrus clementina Ciclev10008921m.g I 0.000
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I 0.000
Cla004524 Citrullus lanatus Cla004524 I 0.000
Cla006077 Citrullus lanatus Cla006077 I 0.000
Cucsa.041880 Cucumis sativus Cucsa.041880 I 0.000
Cucsa.053600 Cucumis sativus Cucsa.053600 I 0.000
Eucgr.D00040 Eucalyptus grandis Eucgr.D00040 I 0.000
Eucgr.D00042 Eucalyptus grandis Eucgr.D00042 I 0.000
Eucgr.F03656 Eucalyptus grandis Eucgr.F03656 I 0.000
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I 0.000
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I 0.000
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I 0.000
evm.TU.supercontig_27.156 Carica papaya evm.TU.supercontig_27.156 N 0.000
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I 0.000
F775_18231 Aegilops tauschii F775_18231 I 0.000
F775_22620 Aegilops tauschii F775_22620 I 0.000
gene01457-v1.0-hybrid Fragaria vesca gene01457-v1.0-hybrid I 0.000
GLYMA03G31980 Glycine max GLYMA03G31980 I 0.000
GLYMA10G32410 Glycine max GLYMA10G32410 I 0.000
GLYMA18G07960 Glycine max GLYMA18G07960 I 0.000
GLYMA19G34740 Glycine max GLYMA19G34740 I 0.000
GLYMA20G35180 Glycine max GLYMA20G35180 I 0.000
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I 0.000
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I 0.000
Gorai.009G454000 Gossypium raimondii Gorai.009G454000 I 0.000
Gorai.011G021300 Gossypium raimondii Gorai.011G021300 N 0.000
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I 0.000
GRMZM2G095904 Zea mays GRMZM2G095904 I 0.000
GRMZM2G173633 Zea mays GRMZM2G173633 I 0.000
GSMUA_Achr11G22820_001 Musa acuminata GSMUA_Achr11G22820_001 I 0.000
GSMUA_Achr4G18180_001 Musa acuminata GSMUA_Achr4G18180_001 I 0.000
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I 0.000
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I 0.000
LPERR04G12420 Leersia perrieri LPERR04G12420 I 0.000
Lus10003557.g Linum usitatissimum Lus10003557.g I 0.000
Lus10033889.g Linum usitatissimum Lus10033889.g I 0.000
Lus10042561.g Linum usitatissimum Lus10042561.g I 0.000
MDP0000145050 Malus domestica MDP0000145050 I 0.000
MDP0000155426 Malus domestica MDP0000155426 I 0.000
MLOC_53640 Hordeum vulgare MLOC_53640 I 0.000
MTR_3g461490 Medicago truncatula MTR_3g461490 I 0.000
OB04G23000 Oryza brachyantha OB04G23000 I 0.000
OGLUM04G15520 Oryza glumaepatula OGLUM04G15520 I 0.000
OMERI04G13500 Oryza meridionalis OMERI04G13500 I 0.000
ONIVA04G13800 Oryza nivara ONIVA04G13800 I 0.000
OPUNC04G13560 Oryza punctata OPUNC04G13560 I 0.000
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I 0.000
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I 0.000
ORGLA04G0126700 Oryza glaberrima ORGLA04G0126700 I 0.000
ORUFI04G17000 Oryza rufipogon ORUFI04G17000 I 0.000
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I 0.000
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I 0.000
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I 0.000
Pavir.Ga01401 Panicum virgatum Pavir.Ga01401 I 0.000
Pavir.J10932 Panicum virgatum Pavir.J10932 I 0.000
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I 0.000
PGSC0003DMG400008687 Solanum tuberosum PGSC0003DMG400008687 I 0.000
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I 0.000
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I 0.000
PK03488.1 Cannabis sativa PK03488.1 I 0.000
PK08038.1 Cannabis sativa PK08038.1 I 0.000
PK20358.1 Cannabis sativa PK20358.1 I 0.000
POPTR_0004s02570 Populus trichocarpa POPTR_0004s02570 I 0.000
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I 0.000
POPTR_0011s04010 Populus trichocarpa POPTR_0011s04010 N 0.000
POPTR_0011s04020 Populus trichocarpa POPTR_0011s04020 N 0.000
POPTR_0011s17060 Populus trichocarpa POPTR_0011s17060 I 0.000
POPTR_0013s14560 Populus trichocarpa POPTR_0013s14560 I 0.000
PRUPE_ppa021719mg Prunus persica PRUPE_ppa021719mg I 0.000
SapurV1A.0048s0160 Salix purpurea SapurV1A.0048s0160 N 0.000
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I 0.000
Sb06g019650 Sorghum bicolor Sb06g019650 I 0.000
Si012130m.g Setaria italica Si012130m.g I 0.000
Si017704m.g Setaria italica Si017704m.g I 0.000
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I 0.000
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I 0.000
Solyc10g005760.1 Solanum lycopersicum Solyc10g005760.1 I 0.000
TCM_004046 Theobroma cacao TCM_004046 I 0.000
TCM_007865 Theobroma cacao TCM_007865 I 0.000
TCM_020889 Theobroma cacao TCM_020889 I 0.000
TCM_030529 Theobroma cacao TCM_030529 I 0.000
TCM_033015 Theobroma cacao TCM_033015 N 0.000
TCM_033016 Theobroma cacao TCM_033016 N 0.000
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I 0.000
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I 0.000
Traes_2BL_34A0848F2 Triticum aestivum Traes_2BL_34A0848F2 I 0.000
Traes_2BL_361925B62 Triticum aestivum Traes_2BL_361925B62 I 0.000
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I 0.000
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I 0.000
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I 0.000
TRIUR3_18702 Triticum urartu TRIUR3_18702 I 0.000
TRIUR3_35325 Triticum urartu TRIUR3_35325 I 0.000
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I 0.000
VIT_12s0134g00480 Vitis vinifera VIT_12s0134g00480 I 0.000
VIT_12s0134g00490 Vitis vinifera VIT_12s0134g00490 I 0.000
AtMYB103 Vitis vinifera VIT_19s0015g01280 I 0.000