Eucgr.K00165 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.K00165 T142872_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.778 0.761
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.777 0.761
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.777 0.739
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.760 0.696
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K00165.1 C2H2 ZF 169 191
Eucgr.K00165.1 C2H2 ZF 209 231

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008818 Ricinus communis 30174.m008818 I 0.807
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.807
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.807
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.800
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.800
mgf021094m Mimulus guttatus mgf021094m I 0.800
mgf017082m Mimulus guttatus mgf017082m I 0.795
Lus10038929.g Linum usitatissimum Lus10038929.g N 0.785
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.784
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.784
OS12G0583700 Oryza sativa OS12G0583700 I 0.784
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.784
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.784
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.784
Ca_05641 Cicer arietinum Ca_05641 I 0.784
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.784
POPTR_0002s14460 Populus trichocarpa POPTR_0002s14460 I 0.783
SapurV1A.0033s0440 Salix purpurea SapurV1A.0033s0440 I 0.782
ORGLA02G0229600 Oryza glaberrima ORGLA02G0229600 I 0.781
BGIOSGA008755 Oryza indica BGIOSGA008755 I 0.781
OBART02G26700 Oryza barthii OBART02G26700 I 0.781
OMERI02G26030 Oryza meridionalis OMERI02G26030 I 0.781
OGLUM02G27190 Oryza glumaepatula OGLUM02G27190 I 0.781
ONIVA02G29150 Oryza nivara ONIVA02G29150 I 0.781
ORUFI02G28150 Oryza rufipogon ORUFI02G28150 I 0.781
OS02G0659500 Oryza sativa OS02G0659500 I 0.781
Gorai.004G164000 Gossypium raimondii Gorai.004G164000 I 0.778
ZAT1 Arabidopsis thaliana AT1G02030 D 0.778
Lus10009278.g Linum usitatissimum Lus10009278.g I 0.778
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I 0.778
Gorai.001G175400 Gossypium raimondii Gorai.001G175400 I 0.777
Bra014483 Brassica rapa Bra014483 I 0.777
Bostr.25993s0262 Boechera stricta Bostr.25993s0262 I 0.777
ZAT9 Arabidopsis thaliana AT3G60580 D 0.777
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.777
ZAT4 Arabidopsis thaliana AT2G45120 D 0.777
scaffold_503291.1 Arabidopsis lyrata scaffold_503291.1 I 0.777
VIT_15s0021g02720 Vitis vinifera VIT_15s0021g02720 I 0.777
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.777
evm.TU.supercontig_2070.1 Carica papaya evm.TU.supercontig_2070.1 I 0.777
GLYMA01G32981 Glycine max GLYMA01G32981 I 0.777
GLYMA03G03950 Glycine max GLYMA03G03950 I 0.777
Bo8g095300 Brassica oleracea Bo8g095300 I 0.777
SapurV1A.0248s0230 Salix purpurea SapurV1A.0248s0230 I 0.777
Carubv10017660m.g Capsella rubella Carubv10017660m.g I 0.777
fgenesh2_kg.4__2705__AT2G45120.1 Arabidopsis lyrata fgenesh2_kg.4__2705__AT2G45120.1 I 0.777
Thhalv10006508m.g Eutrema salsugineum Thhalv10006508m.g I 0.777
Bra007545 Brassica rapa Bra007545 I 0.777
Bra003422 Brassica rapa Bra003422 I 0.777
orange1.1g044606m.g Citrus sinensis orange1.1g044606m.g I 0.777
Bo6g077190 Brassica oleracea Bo6g077190 I 0.777
Cagra.6011s0004 Capsella grandiflora Cagra.6011s0004 I 0.777
Bo4g104940 Brassica oleracea Bo4g104940 I 0.777
evm.TU.supercontig_111.55 Carica papaya evm.TU.supercontig_111.55 N 0.777
Ca_23672 Cicer arietinum Ca_23672 I 0.777
MTR_0160s0030 Medicago truncatula MTR_0160s0030 I 0.777
Ciclev10020499m.g Citrus clementina Ciclev10020499m.g I 0.777
Bostr.13158s0058 Boechera stricta Bostr.13158s0058 I 0.777
LPERR03G21480 Leersia perrieri LPERR03G21480 I 0.774
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I 0.773
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.773
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I 0.773
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.772
Si010615m.g Setaria italica Si010615m.g I 0.772
Cagra.0239s0063 Capsella grandiflora Cagra.0239s0063 I 0.772
Lus10015888.g Linum usitatissimum Lus10015888.g I 0.772
Carubv10023569m.g Capsella rubella Carubv10023569m.g I 0.772
OS04G0552700 Oryza sativa OS04G0552700 I 0.772
OPUNC04G18700 Oryza punctata OPUNC04G18700 I 0.772
ORGLA04G0180800 Oryza glaberrima ORGLA04G0180800 I 0.772
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.772
ONIVA04G19260 Oryza nivara ONIVA04G19260 I 0.772
MTR_4g027440 Medicago truncatula MTR_4g027440 I 0.772
OMERI04G17450 Oryza meridionalis OMERI04G17450 I 0.772
ORUFI04G22610 Oryza rufipogon ORUFI04G22610 I 0.772
GSMUA_Achr11G21040_001 Musa acuminata GSMUA_Achr11G21040_001 I 0.772
GLYMA01G18606 Glycine max GLYMA01G18606 I 0.772
BGIOSGA016894 Oryza indica BGIOSGA016894 I 0.772
GRMZM2G170520 Zea mays GRMZM2G170520 I 0.772
OBART04G21020 Oryza barthii OBART04G21020 I 0.772
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.772
30147.m014242 Ricinus communis 30147.m014242 I 0.768
cassava47027.m1 Manihot esculenta cassava47027.m1 N 0.768
BRADI3G33100 Brachypodium distachyon BRADI3G33100 I 0.766
GSMUA_Achr4G26920_001 Musa acuminata GSMUA_Achr4G26920_001 I 0.766
GSMUA_Achr1G01550_001 Musa acuminata GSMUA_Achr1G01550_001 I 0.766
PGSC0003DMG400020929 Solanum tuberosum PGSC0003DMG400020929 I 0.766
TRIUR3_29692 Triticum urartu TRIUR3_29692 I 0.766
Pavir.Ab02618 Panicum virgatum Pavir.Ab02618 I 0.766
OLONG_016061 Oryza longistaminata OLONG_016061 I 0.766
OB04G28040 Oryza brachyantha OB04G28040 I 0.766
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I 0.764
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I 0.761
30170.m013751 Ricinus communis 30170.m013751 I 0.761
mgf006006m Mimulus guttatus mgf006006m I 0.761
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I 0.761
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I 0.760
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I 0.760
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I 0.760
PK10188.1 Cannabis sativa PK10188.1 I 0.760
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I 0.760
Carubv10014391m.g Capsella rubella Carubv10014391m.g I 0.760
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I 0.760
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I 0.760
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I 0.760
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I 0.760
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I 0.760
MDP0000762756 Malus domestica MDP0000762756 I 0.760
MDP0000319225 Malus domestica MDP0000319225 I 0.760
MDP0000573176 Malus domestica MDP0000573176 I 0.760
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I 0.760
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I 0.760
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I 0.760
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I 0.760
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I 0.760
MDP0000198015 Malus domestica MDP0000198015 I 0.760
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I 0.760
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I 0.760
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I 0.760
TCM_007214 Theobroma cacao TCM_007214 I 0.760
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I 0.760
MTR_3g102980 Medicago truncatula MTR_3g102980 I 0.760
MTR_1g106730 Medicago truncatula MTR_1g106730 I 0.760
MLOC_54674 Hordeum vulgare MLOC_54674 I 0.760
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I 0.760
PGSC0003DMG400028275 Solanum tuberosum PGSC0003DMG400028275 I 0.760
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I 0.760
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I 0.760
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I 0.760
GLYMA17G35430 Glycine max GLYMA17G35430 I 0.760
GLYMA14G09760 Glycine max GLYMA14G09760 I 0.760
Bra022436 Brassica rapa Bra022436 I 0.760
Bo5g113850 Brassica oleracea Bo5g113850 I 0.760
Bo1g113530 Brassica oleracea Bo1g113530 I 0.760
AZF2 Arabidopsis thaliana AT3G19580 D 0.760
Bra038219 Brassica rapa Bra038219 I 0.760
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I 0.760
GLYMA06G04840 Glycine max GLYMA06G04840 I 0.760
GLYMA04G04760 Glycine max GLYMA04G04760 I 0.760
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I 0.760
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I 0.760
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I 0.760
28152.m000908 Ricinus communis 28152.m000908 I 0.760
TCM_034720 Theobroma cacao TCM_034720 I 0.760
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I 0.760
Ca_01586 Cicer arietinum Ca_01586 I 0.760
Pm005390 Prunus mume Pm005390 I 0.760
Pm021284 Prunus mume Pm021284 I 0.760
Ca_18364 Cicer arietinum Ca_18364 I 0.760
29661.m000908 Ricinus communis 29661.m000908 I 0.760
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I 0.760
Si023013m.g Setaria italica Si023013m.g I 0.760
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I 0.760
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.760
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I 0.760
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I 0.759
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I 0.759
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.759
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.759
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I 0.759
Si032711m.g Setaria italica Si032711m.g I 0.759
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I 0.759
MTR_1g018420 Medicago truncatula MTR_1g018420 I 0.759
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.759
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.759
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.758
Bostr.26833s0090 Boechera stricta Bostr.26833s0090 N 0.757
TCM_014903 Theobroma cacao TCM_014903 I 0.757
GSMUA_Achr5G15450_001 Musa acuminata GSMUA_Achr5G15450_001 I 0.756
Cla001400 Citrullus lanatus Cla001400 I 0.756