evm.TU.supercontig_2.118 (Carica papaya)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 evm.TU.supercontig_2.118 T142904_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.811 0.955
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.811 0.955
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_2.118 C2H2 ZF 135 156
evm.model.supercontig_2.118 C2H2 ZF 155 182

Links

Other C2H2 ZF family TFs
Other Carica papaya TFs

Invalid Input OrderBy

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action