evm.TU.supercontig_25.46 (Carica papaya)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 evm.TU.supercontig_25.46 T142908_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
IDD5
M06807_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTTSYD

HRSAAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
IDD5_colamp_a
0.827 0.977
IDD5
M06808_2.00
Arabidopsis thaliana
WTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAW
Dap-seq
OMalley et al.(2016)
IDD5_col
0.827 0.977
AT1G14580
M06797_2.00
Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWWNNN
Dap-seq
OMalley et al.(2016)
At1g14580_col_a
0.827 0.930
AT1G14580
M06798_2.00
Arabidopsis thaliana
NNTTTTGTCKTTTWSYD

HRSWAAAMGACAAAANN
Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a
0.827 0.930
IDD7
M06803_2.00
Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHHN
Dap-seq
OMalley et al.(2016)
IDD7_col_a
0.822 0.953
IDD4
M06809_2.00
Arabidopsis thaliana
WWTTTTGTCKTTTWSYD

HRSWAAAMGACAAAAWW
Dap-seq
OMalley et al.(2016)
IDD4_col_a
0.822 0.907
MGP
M06795_2.00
Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAWHDND
Dap-seq
OMalley et al.(2016)
MGP_col_a
0.822 0.907
MGP
M06796_2.00
Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAHNN
Dap-seq
OMalley et al.(2016)
MGP_colamp_a
0.822 0.907
NUC
M06822_2.00
Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD

HRVWARAMGACAAAANNNNN
Dap-seq
OMalley et al.(2016)
NUC_col_a
0.798 0.884
NUC
M06823_2.00
Arabidopsis thaliana
NDTTTTGTCGTYTWNYD

HRNWARACGACAAAAHN
Dap-seq
OMalley et al.(2016)
NUC_colamp_a
0.798 0.884
JKD
M06818_2.00
Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD

HRVWAAAMGACAAAAWWNDD
Dap-seq
OMalley et al.(2016)
JKD_col_a
0.792 0.930
IDD1
M06824_2.00
Arabidopsis thaliana
DNTTTTGTCKTTTWBYD

HRVWAAAMGACAAAANH
Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a
0.788 0.930
IDD1
M06825_2.00
Arabidopsis thaliana
WDTTTTGTCKTTTWNYD

HRNWAAAMGACAAAAHW
Dap-seq
OMalley et al.(2016)
At5g66730_col
0.788 0.930
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_25.46 C2H2 ZF 169 190
evm.model.supercontig_25.46 C2H2 ZF 189 215

Links

Other C2H2 ZF family TFs
Other Carica papaya TFs

667 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALNC14_061910 Albugo laibachii ALNC14_061910 N 0.000
ALNC14_122900 Albugo laibachii ALNC14_122900 N 0.000
ALNC14_110220 Albugo laibachii ALNC14_110220 N 0.000
ALNC14_092860 Albugo laibachii ALNC14_092860 N 0.000
ALNC14_036480 Albugo laibachii ALNC14_036480 N 0.000
HpaG810452 Hyaloperonospora arabidopsidis HpaG810452 N 0.000
HpaG802951 Hyaloperonospora arabidopsidis HpaG802951 N 0.000
fgenesh1_pm.C_scaffold_10000249 Phytophthora capsici fgenesh1_pm.C_scaffold_10000249 N 0.000
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N 0.000
estExt_fgenesh1_kg.C_21048 Phytophthora capsici estExt_fgenesh1_kg.C_21048 N 0.000
estExt_fgenesh1_kg.C_21051 Phytophthora capsici estExt_fgenesh1_kg.C_21051 N 0.000
estExt_fgenesh1_pg.C_230105 Phytophthora capsici estExt_fgenesh1_pg.C_230105 N 0.000
PITG_03306 Phytophthora infestans PITG_03306 N 0.000
PITG_04694 Phytophthora infestans PITG_04694 N 0.000
PITG_04700 Phytophthora infestans PITG_04700 N 0.000
PITG_20387 Phytophthora infestans PITG_20387 N 0.000
fgenesh_scip_prom.46568.6540 Phytophthora kernoviae fgenesh_scip_prom.46568.6540 N 0.000
fgenesh_scip_prom.46568.8093 Phytophthora kernoviae fgenesh_scip_prom.46568.8093 N 0.000
fgenesh_scip_prom.28083.11749 Phytophthora lateralis fgenesh_scip_prom.28083.11749 N 0.000
fgenesh_scip_prom.28083.4438 Phytophthora lateralis fgenesh_scip_prom.28083.4438 N 0.000
fgenesh_scip_prom.28083.5336 Phytophthora lateralis fgenesh_scip_prom.28083.5336 N 0.000
F443_15766 Phytophthora parasitica F443_15766 N 0.000
F443_18703 Phytophthora parasitica F443_18703 N 0.000
F443_08033 Phytophthora parasitica F443_08033 N 0.000
F443_13225 Phytophthora parasitica F443_13225 N 0.000
F443_18702 Phytophthora parasitica F443_18702 N 0.000
Phyra85808 Phytophthora ramorum Phyra85808 N 0.000
Phyra85976 Phytophthora ramorum Phyra85976 N 0.000
Phyra95869 Phytophthora ramorum Phyra95869 N 0.000
Phyra80975 Phytophthora ramorum Phyra80975 N 0.000
Physo130849 Phytophthora sojae Physo130849 N 0.000
Physo134018 Phytophthora sojae Physo134018 N 0.000
Physo134258 Phytophthora sojae Physo134258 N 0.000
Physo142192 Phytophthora sojae Physo142192 N 0.000
Physo134017 Phytophthora sojae Physo134017 N 0.000
Physo138014 Phytophthora sojae Physo138014 N 0.000
maker-pag1_scaffold_183-snap-gene-0.28 Pythium aphanidermatum maker-pag1_scaffold_183-snap-gene-0.28 N 0.000
maker-pag1_scaffold_785-snap-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_785-snap-gene-0.4 N 0.000
maker-pag1_scaffold_526-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_526-fgenesh-gene-0.3 N 0.000
maker-pag1_scaffold_440-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_440-fgenesh-gene-0.4 N 0.000
maker-pag1_scaffold_438-snap-gene-0.7 Pythium aphanidermatum maker-pag1_scaffold_438-snap-gene-0.7 N 0.000
maker-pag1_scaffold_287-snap-gene-0.16 Pythium aphanidermatum maker-pag1_scaffold_287-snap-gene-0.16 N 0.000
maker-pag1_scaffold_1127-snap-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_1127-snap-gene-0.1 I 0.000
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N 0.000
maker-par_contig_2316-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2316-fgenesh-gene-0.0 N 0.000
snap-par_contig_1252-abinit-gene-0.18 Pythium arrhenomanes snap-par_contig_1252-abinit-gene-0.18 I 0.000
maker-pir_contig_2-fgenesh-gene-0.32 Pythium irregulare maker-pir_contig_2-fgenesh-gene-0.32 N 0.000
maker-pir_contig_294-snap-gene-0.10 Pythium irregulare maker-pir_contig_294-snap-gene-0.10 N 0.000
maker-pir_contig_4474-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_4474-fgenesh-gene-0.0 N 0.000
maker-pir_contig_551-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_551-fgenesh-gene-0.4 N 0.000
maker-pir_contig_698-fgenesh-gene-0.1 Pythium irregulare maker-pir_contig_698-fgenesh-gene-0.1 N 0.000
maker-piw_contig_372-fgenesh-gene-0.4 Pythium iwayamai maker-piw_contig_372-fgenesh-gene-0.4 N 0.000
fgenesh-piw_contig_392-abinit-gene-0.52 Pythium iwayamai fgenesh-piw_contig_392-abinit-gene-0.52 N 0.000
PYU1_G003405 Pythium ultimum PYU1_G003405 N 0.000
PYU1_G013874 Pythium ultimum PYU1_G013874 N 0.000
PYU1_G001667 Pythium ultimum PYU1_G001667 N 0.000
PYU1_G000710 Pythium ultimum PYU1_G000710 N 0.000
maker-pve_contig_835-fgenesh-gene-0.1 Pythium vexans maker-pve_contig_835-fgenesh-gene-0.1 N 0.000
maker-pve_contig_642-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_642-fgenesh-gene-0.5 N 0.000
snap_masked-pve_contig_472-abinit-gene-0.36 Pythium vexans snap_masked-pve_contig_472-abinit-gene-0.36 N 0.000
maker-pve_contig_563-fgenesh-gene-0.8 Pythium vexans maker-pve_contig_563-fgenesh-gene-0.8 N 0.000
maker-pve_contig_1305-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_1305-fgenesh-gene-0.0 N 0.000
SPRG_00136 Saprolegnia parasitica SPRG_00136 N 0.000
SPRG_18325 Saprolegnia parasitica SPRG_18325 N 0.000
SPRG_10710 Saprolegnia parasitica SPRG_10710 N 0.000
SPRG_04538 Saprolegnia parasitica SPRG_04538 N 0.000
SPRG_01018 Saprolegnia parasitica SPRG_01018 N 0.000
SPRG_00586 Saprolegnia parasitica SPRG_00586 N 0.000
SPRG_11849 Saprolegnia parasitica SPRG_11849 N 0.000