CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene03614-v1.0-hybrid
(
Fragaria vesca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gene03614-v1.0-hybrid
T142943_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna03614.1-v1.0-hybrid
C2H2 ZF
20
43
YYCEYCGNCRSKKSLIASHILAQH
mrna03614.1-v1.0-hybrid
C2H2 ZF
62
84
NTCEECGASFNKPAYLKQHMISH
mrna03614.1-v1.0-hybrid
C2H2 ZF
127
151
YVCTIDDCRSAYRRKDHLNRHLLQH
mrna03614.1-v1.0-hybrid
C2H2 ZF
156
181
FKCPIENCKSEFAFQGNVKRHVVELH
mrna03614.1-v1.0-hybrid
C2H2 ZF
196
215
HVCQEPGCGKVFQFASKLWK
Links
Other
C2H2 ZF
family TFs
Other
Fragaria vesca
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TCM_036409
Theobroma cacao
TCM_036409
N
0.783
Gorai.009G288800
Gossypium raimondii
Gorai.009G288800
N
0.764