gene13234-v1.0-hybrid (Fragaria vesca)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 gene13234-v1.0-hybrid T142956_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13234.1-v1.0-hybrid C2H2 ZF 132 155

Links

Other C2H2 ZF family TFs
Other Fragaria vesca TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr1G03120_001 Musa acuminata GSMUA_Achr1G03120_001 N 0.817
30169.m006244 Ricinus communis 30169.m006244 N 0.768
Pm019310 Prunus mume Pm019310 N 0.768
TCM_015200 Theobroma cacao TCM_015200 N 0.768
PRUPE_ppa002336mg Prunus persica PRUPE_ppa002336mg N 0.768
evm.TU.supercontig_107.76 Carica papaya evm.TU.supercontig_107.76 N 0.768
Gorai.004G117900 Gossypium raimondii Gorai.004G117900 N 0.768
MDP0000291317 Malus domestica MDP0000291317 N 0.768
PK09701.1 Cannabis sativa PK09701.1 N 0.768
Gorai.008G275600 Gossypium raimondii Gorai.008G275600 N 0.768
cassava18962.valid.m1 Manihot esculenta cassava18962.valid.m1 N 0.758
Aquca_013_00290 Aquilegia coerulea Aquca_013_00290 N 0.758
mgf002951m Mimulus guttatus mgf002951m N 0.758
OS09G0570200 Oryza sativa OS09G0570200 N 0.758
OBART09G20240 Oryza barthii OBART09G20240 N 0.758
OGLUM09G20980 Oryza glumaepatula OGLUM09G20980 N 0.758
GRMZM2G142502 Zea mays GRMZM2G142502 N 0.758
GLYMA10G37780 Glycine max GLYMA10G37780 N 0.758
BGIOSGA031305 Oryza indica BGIOSGA031305 N 0.758
OLONG_005584 Oryza longistaminata OLONG_005584 N 0.758
OMERI01G25790 Oryza meridionalis OMERI01G25790 N 0.758
ORUFI09G21860 Oryza rufipogon ORUFI09G21860 N 0.758
ORGLA09G0165100 Oryza glaberrima ORGLA09G0165100 N 0.758
OPUNC09G18580 Oryza punctata OPUNC09G18580 N 0.758
AC234522.1_FG009 Zea mays AC234522.1_FG009 N 0.758
ONIVA03G00390 Oryza nivara ONIVA03G00390 N 0.758
VIT_16s0050g00700 Vitis vinifera VIT_16s0050g00700 N 0.756