Gorai.004G117900 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.004G117900 T143009_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G117900.1 C2H2 ZF 95 118
Gorai.004G117900.2 C2H2 ZF 62 85
Gorai.004G117900.3 C2H2 ZF 62 85
Gorai.004G117900.4 C2H2 ZF 62 85
Gorai.004G117900.5 C2H2 ZF 62 85
Gorai.004G117900.6 C2H2 ZF 62 85

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AAEL000041 Aedes aegypti AAEL000041 I 0.000
AAEL015632 Aedes aegypti AAEL015632 I 0.000
AALB009484 Anopheles albimanus AALB009484 I 0.000
Aan_R012851 Calypte anna Aan_R012851 I 0.000
AARA004720 Anopheles arabiensis AARA004720 I 0.000
AATE008326 Anopheles atroparvus AATE008326 I 0.000
ACEP22192 Atta cephalotes ACEP22192 I 0.000
ACHR000066 Anopheles christyi ACHR000066 I 0.000
ACOM037496 Anopheles coluzzii ACOM037496 I 0.000
ACUA019142 Anopheles culicifacies ACUA019142 I 0.000
ACYPI55143 Acyrthosiphon pisum ACYPI55143 I 0.000
ADIR002760 Anopheles dirus ADIR002760 I 0.000
AEPI002386 Anopheles epiroticus AEPI002386 I 0.000
AFAF012594 Anopheles farauti AFAF012594 I 0.000
Afo_R006429 Aptenodytes forsteri Afo_R006429 I 0.000
AFUN009863 Anopheles funestus AFUN009863 I 0.000
AGAP002903 Anopheles gambiae AGAP002903 I 0.000
Alligator_sinensis_CCG012275.1 Alligator sinensis Alligator_sinensis_CCG012275.1 I 0.000
AMEC017755 Anopheles melas AMEC017755 I 0.000
AMEM004834 Anopheles merus AMEM004834 I 0.000
AMIN000724 Anopheles minimus AMIN000724 I 0.000
AQUA009304 Anopheles quadriannulatus AQUA009304 I 0.000
ASTEI00078 Anopheles stephensi ASTEI00078 I 0.000
A_01406 Schistosoma haematobium A_01406 I 0.000
BGIBMGA005669 Bombyx mori BGIBMGA005669 I 0.000
BGLB014205 Biomphalaria glabrata BGLB014205 I 0.000
CapteG222987 Capitella teleta CapteG222987 I 0.000
Cflo_07076--XP_623740.2_APIME Camponotus floridanus Cflo_07076--XP_623740.2_APIME I 0.000
CGI_10021832 Crassostrea gigas CGI_10021832 I 0.000
CLEC000256 Cimex lectularius CLEC000256 I 0.000
Cmyd_10005683 Chelonia mydas Cmyd_10005683 I 0.000
Cmyd_10016658 Chelonia mydas Cmyd_10016658 I 0.000
CPIJ016958 Culex quinquefasciatus CPIJ016958 I 0.000
CpipJ_CPIJ016958 Culex pipiens CpipJ_CPIJ016958 I 0.000
csin105476 Clonorchis sinensis csin105476 I 0.000
DAPPUDRAFT_8603 Daphnia pulex DAPPUDRAFT_8603 I 0.000
DILT_0000300801 Diphyllobothrium latum DILT_0000300801 I 0.000
ECANG7_05018 Echinococcus canadensis ECANG7_05018 I 0.000
EmuJ_000660100 Echinococcus multilocularis EmuJ_000660100 I 0.000
ENSACAG00000004870 Anolis carolinensis ENSACAG00000004870 I 0.000
ENSAMEG00000000591 Ailuropoda melanoleuca ENSAMEG00000000591 I 0.000
ENSAMEG00000010217 Ailuropoda melanoleuca ENSAMEG00000010217 I 0.000
ENSAMXG00000006564 Astyanax mexicanus ENSAMXG00000006564 I 0.000
ENSAMXG00000016940 Astyanax mexicanus ENSAMXG00000016940 I 0.000
ENSAPLG00000003960 Anas platyrhynchos ENSAPLG00000003960 I 0.000
ENSBTAP00000053827-D1 Bos grunniens ENSBTAP00000053827-D1 I 0.000
ENSCPOG00000010965 Cavia porcellus ENSCPOG00000010965 I 0.000
ENSCPOG00000024703 Cavia porcellus ENSCPOG00000024703 I 0.000
ENSCSAG00000001162 Chlorocebus sabaeus ENSCSAG00000001162 I 0.000
ENSCSAG00000004998 Chlorocebus sabaeus ENSCSAG00000004998 I 0.000
ENSFALG00000000971 Ficedula albicollis ENSFALG00000000971 I 0.000
ENSGMOG00000001764 Gadus morhua ENSGMOG00000001764 I 0.000
ENSGMOG00000015882 Gadus morhua ENSGMOG00000015882 I 0.000
ENSLACG00000008649 Latimeria chalumnae ENSLACG00000008649 I 0.000
ENSLACG00000016329 Latimeria chalumnae ENSLACG00000016329 I 0.000
ENSLACG00000016929 Latimeria chalumnae ENSLACG00000016929 I 0.000
ENSLOCG00000001575 Lepisosteus oculatus ENSLOCG00000001575 I 0.000
ENSLOCG00000011207 Lepisosteus oculatus ENSLOCG00000011207 I 0.000
ENSMEUG00000005169 Macropus eugenii ENSMEUG00000005169 I 0.000
ENSMEUG00000007843 Macropus eugenii ENSMEUG00000007843 I 0.000
ENSMICG00000010441 Microcebus murinus ENSMICG00000010441 I 0.000
ENSMICG00000013240 Microcebus murinus ENSMICG00000013240 I 0.000
ENSMPUG00000013521 Mustela putorius furo ENSMPUG00000013521 I 0.000
ENSMPUG00000014045 Mustela putorius furo ENSMPUG00000014045 I 0.000
ENSNLEG00000002164 Nomascus leucogenys ENSNLEG00000002164 I 0.000
ENSNLEG00000012288 Nomascus leucogenys ENSNLEG00000012288 I 0.000
ENSOANG00000009728 Ornithorhynchus anatinus ENSOANG00000009728 I 0.000
ENSOARG00000007895 Ovis aries ENSOARG00000007895 I 0.000
ENSOARG00000020401 Ovis aries ENSOARG00000020401 I 0.000
ENSONIG00000003923 Oreochromis niloticus ENSONIG00000003923 I 0.000
ENSONIG00000009418 Oreochromis niloticus ENSONIG00000009418 I 0.000
ENSONIG00000019769 Oreochromis niloticus ENSONIG00000019769 I 0.000
ENSP00000323880-D1 Bos grunniens ENSP00000323880-D1 I 0.000
ENSPANG00000004657 Papio anubis ENSPANG00000004657 I 0.000
ENSPANG00000020054 Papio anubis ENSPANG00000020054 I 0.000
ENSPFOG00000004597 Poecilia formosa ENSPFOG00000004597 I 0.000
ENSPFOG00000014598 Poecilia formosa ENSPFOG00000014598 I 0.000
ENSPFOG00000019618 Poecilia formosa ENSPFOG00000019618 I 0.000
ENSPMAG00000005958 Petromyzon marinus ENSPMAG00000005958 I 0.000
ENSPMAG00000006623 Petromyzon marinus ENSPMAG00000006623 I 0.000
ENSPPYG00000001472 Pongo abelii ENSPPYG00000001472 I 0.000
ENSPPYG00000008652 Pongo abelii ENSPPYG00000008652 I 0.000
ENSPSIG00000002424 Pelodiscus sinensis ENSPSIG00000002424 I 0.000
ENSPSIG00000017578 Pelodiscus sinensis ENSPSIG00000017578 I 0.000
ENSSHAG00000012097 Sarcophilus harrisii ENSSHAG00000012097 I 0.000
ENSSHAG00000017120 Sarcophilus harrisii ENSSHAG00000017120 I 0.000
ENSSTOG00000021584 Ictidomys tridecemlineatus ENSSTOG00000021584 I 0.000
ENSXMAG00000017058 Xiphophorus maculatus ENSXMAG00000017058 I 0.000
estExt_fgenesh2_pg.C_170078 Branchiostoma floridae estExt_fgenesh2_pg.C_170078 I 0.000
FOXJ1 Pteropus vampyrus ENSPVAG00000008491 I 0.000
FOXJ1 Tupaia belangeri ENSTBEG00000005900 I 0.000
FOXJ1 Felis catus ENSFCAG00000005772 I 0.000
FOXJ1 Bos taurus ENSBTAG00000007916 I 0.000
FOXJ1 Gorilla gorilla ENSGGOG00000007282 I 0.000
FOXJ1 Canis familiaris ENSCAFG00000005050 I 0.000
FOXJ1 Taeniopygia guttata ENSTGUG00000008019 I 0.000
FOXJ1 Tursiops truncatus ENSTTRG00000015916 I 0.000
foxj1 Xenopus tropicalis XB-GENE-853648 I 0.000
FOXJ1 Anolis carolinensis ENSACAG00000008123 I 0.000
FOXJ1 Pan troglodytes ENSPTRG00000009674 I 0.000
FOXJ1 Ornithorhynchus anatinus ENSOANG00000014384 I 0.000
FOXJ1 Loxodonta africana ENSLAFG00000032043 I 0.000
FOXJ1 Meleagris gallopavo ENSMGAG00000004252 I 0.000
FOXJ1 Oryctolagus cuniculus ENSOCUG00000011472 I 0.000
FOXJ1 Myotis lucifugus ENSMLUG00000006595 I 0.000
Foxj1 Mus musculus ENSMUSG00000034227 D 0.000
FOXJ1 Homo sapiens ENSG00000129654 D 0.000
FOXJ1 Otolemur garnettii ENSOGAG00000026625 I 0.000
FOXJ1 Equus caballus ENSECAG00000014390 I 0.000
FOXJ1 Ochotona princeps ENSOPRG00000011410 I 0.000
FOXJ1 Macaca mulatta ENSMMUG00000003533 I 0.000
FOXJ1 Procavia capensis ENSPCAG00000015387 I 0.000
FOXJ1 Callithrix jacchus ENSCJAG00000013682 I 0.000
FOXJ1 Monodelphis domestica ENSMODG00000008306 I 0.000
FOXJ1 Sus scrofa ENSSSCG00000017187 I 0.000
FOXJ1 Dasypus novemcinctus ENSDNOG00000036643 I 0.000
foxj1.2 Xenopus tropicalis XB-GENE-919738 I 0.000
foxj1.2.L Xenopus laevis XB-GENE-919747 I 0.000
foxj1.L Xenopus laevis XB-GENE-856300 I 0.000
foxj1.S Xenopus laevis XB-GENE-6254646 I 0.000
foxj1a Danio rerio ENSDARG00000101919 I 0.000
foxj1a Tetraodon nigroviridis ENSTNIG00000011308 I 0.000
foxj1a Takifugu rubripes ENSTRUG00000001697 I 0.000
foxj1a Gasterosteus aculeatus ENSGACG00000014879 I 0.000
foxj1b Gasterosteus aculeatus ENSGACG00000004462 I 0.000
foxj1b Danio rerio ENSDARG00000088290 I 0.000
foxj1b Takifugu rubripes ENSTRUG00000016940 I 0.000
foxj1b Tetraodon nigroviridis ENSTNIG00000012916 I 0.000
foxj3 Xenopus tropicalis XB-GENE-481185 I 0.000
FOXJ3 Myotis lucifugus ENSMLUG00000005770 I 0.000
Foxj3 Mus musculus ENSMUSG00000032998 D 0.000
FOXJ3 Equus caballus ENSECAG00000008665 I 0.000
FOXJ3 Echinops telfairi ENSETEG00000014454 I 0.000
FOXJ3 Felis catus ENSFCAG00000026568 I 0.000
FOXJ3 Homo sapiens ENSG00000198815 D 0.000
FOXJ3 Tursiops truncatus ENSTTRG00000003605 I 0.000
foxj3 Gasterosteus aculeatus ENSGACG00000007398 I 0.000
foxj3 Tetraodon nigroviridis ENSTNIG00000014781 I 0.000
Foxj3 Rattus norvegicus ENSRNOG00000061851 I 0.000
FOXJ3 Pan troglodytes ENSPTRG00000000606 I 0.000
FOXJ3 Callithrix jacchus ENSCJAG00000003088 I 0.000
FOXJ3 Gorilla gorilla ENSGGOG00000013618 I 0.000
FOXJ3 Ochotona princeps ENSOPRG00000003174 I 0.000
FOXJ3 Loxodonta africana ENSLAFG00000017663 I 0.000
FOXJ3 Monodelphis domestica ENSMODG00000017320 I 0.000
FOXJ3 Macaca mulatta ENSMMUG00000014138 I 0.000
Foxj3 Dipodomys ordii ENSDORG00000015838 I 0.000
FOXJ3 Vicugna pacos ENSVPAG00000005858 I 0.000
FOXJ3 Bos taurus ENSBTAG00000015887 I 0.000
foxj3 Takifugu rubripes ENSTRUG00000014515 I 0.000
FOXJ3 Oryctolagus cuniculus ENSOCUG00000011647 I 0.000
FOXJ3 Canis familiaris ENSCAFG00000002563 I 0.000
FOXJ3 Dasypus novemcinctus ENSDNOG00000008585 I 0.000
foxj3 Danio rerio ENSDARG00000075774 I 0.000
GB50277 Apis mellifera GB50277 I 0.000
Gfo_R007395 Geospiza fortis Gfo_R007395 I 0.000
HDID_0000845501 Hymenolepis diminuta HDID_0000845501 I 0.000
HMEL002016 Heliconius melpomene HMEL002016 I 0.000
HmN_000875600 Hymenolepis microstoma HmN_000875600 I 0.000
HNAJ_0000187001 Hymenolepis nana HNAJ_0000187001 I 0.000
Hsal_04799--XP_623740.2_APIME Harpegnathos saltator Hsal_04799--XP_623740.2_APIME I 0.000
ISCW018243 Ixodes scapularis ISCW018243 I 0.000
L798_14003 Zootermopsis nevadensis L798_14003 I 0.000
LDEC013372 Leptinotarsa decemlineata LDEC013372 I 0.000
LotgiG69660 Lottia gigantea LotgiG69660 I 0.000
MCINX001888 Melitaea cinxia MCINX001888 I 0.000
ML23712a Mnemiopsis leidyi ML23712a I 0.000
Myotis_brandtii_FOXJ3_10016772 Myotis brandtii Myotis_brandtii_FOXJ3_10016772 I 0.000
NEMVEDRAFT_v1g65438 Nematostella vectensis NEMVEDRAFT_v1g65438 I 0.000
O9G_002720 Rozella allomycis O9G_002720 I 0.000
Ocbimv22006019m.g Octopus bimaculoides Ocbimv22006019m.g I 0.000
Ogr05152 Ophisaurus gracilis Ogr05152 I 0.000
Ogr16080 Ophisaurus gracilis Ogr16080 I 0.000
PHUM083480 Pediculus humanus PHUM083480 I 0.000
Pvit_10306 Pogona vitticeps Pvit_10306 I 0.000
RO3G_14601 Rhizopus oryzae RO3G_14601 I 0.000
RO3G_16764 Rhizopus oryzae RO3G_16764 I 0.000
Sakowv30013869m.g Saccoglossus kowalevskii Sakowv30013869m.g I 0.000
Sakowv30028437m.g Saccoglossus kowalevskii Sakowv30028437m.g I 0.000
SINV20866 Solenopsis invicta SINV20866 I 0.000
SMAR007498 Strigamia maritima SMAR007498 I 0.000
SMAR009566 Strigamia maritima SMAR009566 I 0.000
SMU15026964 Schmidtea mediterranea SMU15026964 I 0.000
SMU15031994 Schmidtea mediterranea SMU15031994 I 0.000
SMU15036325 Schmidtea mediterranea SMU15036325 I 0.000
SPU_007644 Strongylocentrotus purpuratus SPU_007644 D 0.000
SPU_011635 Strongylocentrotus purpuratus SPU_011635 I 0.000
SPU_027969 Strongylocentrotus purpuratus SPU_027969 I 0.000
T265_06415 Opisthorchis viverrini T265_06415 I 0.000
Tal_R007079 Tyto alba Tal_R007079 I 0.000
TASK_0000605401 Taenia asiatica TASK_0000605401 I 0.000
TC005573 Tribolium castaneum TC005573 I 0.000
TriadG17444 Trichoplax adhaerens TriadG17444 I 0.000
TsM_000185900 Taenia solium TsM_000185900 I 0.000
TTAC_0000110701 Hydatigera taeniaeformis TTAC_0000110701 I 0.000
XP_002158068.1 Hydra magnipapillata XP_002158068.1 I 0.000
YQE_06872 Dendroctonus ponderosae YQE_06872 I 0.000