Gorai.006G104700 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.006G104700 T143020_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G104700.1 C2H2 ZF 315 337
Gorai.006G104700.1 C2H2 ZF 338 363

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf025993m Mimulus guttatus mgf025993m N 0.825
Ciclev10029807m.g Citrus clementina Ciclev10029807m.g N 0.825
Ciclev10029984m.g Citrus clementina Ciclev10029984m.g N 0.825
cassava28521.m1 Manihot esculenta cassava28521.m1 N 0.825
cassava27114.m1 Manihot esculenta cassava27114.m1 N 0.825
TCM_041585 Theobroma cacao TCM_041585 N 0.825
Pm001162 Prunus mume Pm001162 N 0.825
Eucgr.J00391 Eucalyptus grandis Eucgr.J00391 N 0.825
gene01102-v1.0-hybrid Fragaria vesca gene01102-v1.0-hybrid N 0.825
orange1.1g044007m.g Citrus sinensis orange1.1g044007m.g N 0.825
SapurV1A.0360s0140 Salix purpurea SapurV1A.0360s0140 N 0.825
orange1.1g042026m.g Citrus sinensis orange1.1g042026m.g N 0.825
MDP0000610922 Malus domestica MDP0000610922 N 0.825
Gorai.009G090000 Gossypium raimondii Gorai.009G090000 N 0.825
MDP0000224892 Malus domestica MDP0000224892 N 0.825
POPTR_0004s22670 Populus trichocarpa POPTR_0004s22670 N 0.825
PRUPE_ppa019036mg Prunus persica PRUPE_ppa019036mg N 0.825
GLYMA12G30285 Glycine max GLYMA12G30285 N 0.825
OS04G0165200 Oryza sativa OS04G0165200 N 0.819
GSMUA_Achr11G02230_001 Musa acuminata GSMUA_Achr11G02230_001 N 0.819
OMERI04G02190 Oryza meridionalis OMERI04G02190 N 0.819
OBART04G02230 Oryza barthii OBART04G02230 N 0.819
OGLUM04G01880 Oryza glumaepatula OGLUM04G01880 N 0.819
ORUFI04G02970 Oryza rufipogon ORUFI04G02970 N 0.819
ONIVA08G18580 Oryza nivara ONIVA08G18580 N 0.819
OPUNC04G02200 Oryza punctata OPUNC04G02200 N 0.819
BGIOSGA015622 Oryza indica BGIOSGA015622 N 0.819
ORGLA04G0016600 Oryza glaberrima ORGLA04G0016600 N 0.819
GLYMA13G39610 Glycine max GLYMA13G39610 N 0.818
Cucsa.200410 Cucumis sativus Cucsa.200410 N 0.818
Cla001892 Citrullus lanatus Cla001892 N 0.818
Ca_07000 Cicer arietinum Ca_07000 N 0.815
Eucgr.B03926 Eucalyptus grandis Eucgr.B03926 N 0.815
chr3.CM0070.360.nc Lotus japonicus chr3.CM0070.360.nc N 0.815
PGSC0003DMG400000419 Solanum tuberosum PGSC0003DMG400000419 N 0.815
Solyc11g066420.1 Solanum lycopersicum Solyc11g066420.1 N 0.815
GSMUA_Achr1G15330_001 Musa acuminata GSMUA_Achr1G15330_001 N 0.809
29589.m001269 Ricinus communis 29589.m001269 N 0.809
VIT_06s0061g00780 Vitis vinifera VIT_06s0061g00780 N 0.801
AMTR_s00140p00061590 Amborella trichopoda AMTR_s00140p00061590 N 0.800
GLYMA12G08680 Glycine max GLYMA12G08680 N 0.790
ORUFI08G26260 Oryza rufipogon ORUFI08G26260 N 0.790
OGLUM08G25260 Oryza glumaepatula OGLUM08G25260 N 0.790
OPUNC08G21710 Oryza punctata OPUNC08G21710 N 0.776
LPERR08G20460 Leersia perrieri LPERR08G20460 N 0.776
OB08G30610 Oryza brachyantha OB08G30610 N 0.776
Sb07g023890 Sorghum bicolor Sb07g023890 N 0.776
GLYMA11G19810 Glycine max GLYMA11G19810 N 0.776
Si013894m.g Setaria italica Si013894m.g N 0.776
Aquca_009_01096 Aquilegia coerulea Aquca_009_01096 N 0.770
Pavir.Fb02219 Panicum virgatum Pavir.Fb02219 N 0.766
TRIUR3_12142 Triticum urartu TRIUR3_12142 N 0.766
OLONG_023180 Oryza longistaminata OLONG_023180 N 0.766
Pavir.Fa00049 Panicum virgatum Pavir.Fa00049 N 0.766
BGIOSGA026480 Oryza indica BGIOSGA026480 N 0.766
OS08G0562300 Oryza sativa OS08G0562300 N 0.766
OMERI08G18590 Oryza meridionalis OMERI08G18590 N 0.766
BRADI3G12490 Brachypodium distachyon BRADI3G12490 N 0.766
ORGLA08G0191700 Oryza glaberrima ORGLA08G0191700 N 0.766