Gorai.006G131700 (Gossypium raimondii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gorai.006G131700 T143024_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.793 0.911
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.793 0.911
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G131700.1 C2H2 ZF 343 371
Gorai.006G131700.1 C2H2 ZF 370 401
Gorai.006G131700.2 C2H2 ZF 343 371
Gorai.006G131700.2 C2H2 ZF 370 401
Gorai.006G131700.3 C2H2 ZF 343 371
Gorai.006G131700.3 C2H2 ZF 370 401
Gorai.006G131700.4 C2H2 ZF 343 371
Gorai.006G131700.4 C2H2 ZF 370 401

Links

Other C2H2 ZF family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action