CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.009G128000
(
Gossypium raimondii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gorai.009G128000
T143060_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.009G128000.1
C2H2 ZF
38
61
YFCDHCGICRSKKSLITTHILTHH
Gorai.009G128000.1
C2H2 ZF
80
101
ECQECGATFRKPAHLKQHLQSH
Gorai.009G128000.1
C2H2 ZF
107
131
FVCLVDDCHASYRRKDHLNRHLLQH
Gorai.009G128000.1
C2H2 ZF
136
161
FSCPIETCNSKFAFQGNMKRHVKEFH
Gorai.009G128000.1
C2H2 ZF
176
200
YICQEVGCGKVFKFSSKLRKHEDSH
Gorai.009G128000.2
C2H2 ZF
20
43
YFCDHCGICRSKKSLITTHILTHH
Gorai.009G128000.2
C2H2 ZF
62
83
ECQECGATFRKPAHLKQHLQSH
Gorai.009G128000.2
C2H2 ZF
89
113
FVCLVDDCHASYRRKDHLNRHLLQH
Gorai.009G128000.2
C2H2 ZF
118
143
FSCPIETCNSKFAFQGNMKRHVKEFH
Gorai.009G128000.2
C2H2 ZF
158
182
YICQEVGCGKVFKFSSKLRKHEDSH
Gorai.009G128000.3
C2H2 ZF
29
53
FVCLVDDCHASYRRKDHLNRHLLQH
Gorai.009G128000.3
C2H2 ZF
58
83
FSCPIETCNSKFAFQGNMKRHVKEFH
Gorai.009G128000.3
C2H2 ZF
98
122
YICQEVGCGKVFKFSSKLRKHEDSH
Links
Other
C2H2 ZF
family TFs
Other
Gossypium raimondii
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy